FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.685e-15 Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVN 485 +++ INGFGRIGR V R I++ R D+E+VA+ND + ++ ++DSVHG++ D + G P+ V +RNP E+PWA G + +E TG+FT V++SAP A +V GVN Sbjct: 3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFP--AKVTSGDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVN 135
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.874e-15 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVN 485 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP KD +V GVN Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVN 139
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 3.753e-15 Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHE 494 +++ INGFGRIGR V R + R+ +++VA+ND ++ +YDSVHG + E++ + + G++ + V +RNP E+PW G + V+E TG+FT V+ISAP KD VV GVN HE Sbjct: 3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAIND-LGDAAVNAHLFQYDSVHGHFPG-EVEHDAESLRVMGDR-IAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVN-HE 140
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.753e-15 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 69 IMGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 506 + K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + V D + G K + V RNP +PW + G + V+E TGVF V+I+AP K D P +VVGVN Y P+ Sbjct: 54 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPD 200
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 3.753e-15 Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPE 506 ++ INGFGRIGR R L R D +E+V +ND T+D T ++ +YDS+ G K D+ ++ K + RNP +PWAE + V+E+TGVF V+I+AP K + +VVGVN HEYK E Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGIND---TSDPRTNAHLLRYDSMLG--KLDADISADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVGVNAHEYKHE 144
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.901e-15 Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNE 488 K+GINGFGRIGRLV R +L+ + ++++VA+ND + + Y+ K+DS +G + +D +L+ K + V+ + + IPW GAE +VE TG +T V+ISAP+ + V VN+ Sbjct: 3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYKVND 135
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15 Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPEL 509 +I INGFGRIGR V R +L+RD D+++VAVND + + YD+ G+ + V+ + ++ G + +TV R P +PWAE G + V+E+TG FT V++SAP+ A + GVN Y P+L Sbjct: 3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSGRLGR-PVTVEGNVLVVDGRR-ITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDL 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.361e-15 Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM--FVVGVNEHEY 497 KV++ INGFGRIGR R R D +++V +ND T+ T ++ KYDS+ G + + +D T+ K + V RNP E+PW E + VVE+TGVF V+I+AP K + FVVGVN+H Y Sbjct: 80 KVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCIND---TSGVKTASHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLY 220
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 8.361e-15 Identity = 52/143 (36.36%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 497 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K + + K + V RNP +PW E G + V+E TGVF VII+AP K D P +VVGVN Y Sbjct: 61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAY 201
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.092e-14 Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFG--EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPM--FVVGVNEHEYKPE 506 V++G+NGFGRIGR V R L DDVE+V +ND ++ + Y +YDSV G+ + + DD L + +F +P ++PW + + E+TG+F V+ISAP K D P+ V GVN EY E Sbjct: 6 VRVGLNGFGRIGRNVFRASLHSDDVEIVGINDVMDDSE-IDYFAQYDSVMGELEGASV---DDGVLTVDGTDFEAGIFHETDPTQLPWDDLDVDVAFEATGIFRTKEDASQHLDAGADKVLISAPPKGDEPVKQLVYGVNHDEYDGE 148 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |