FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CYAP8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.268e-56 Identity = 106/160 (66.25%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIGTQTLDIV ++ D+F+VV LA +N LLA Q+K+F+P++VA+ ES L+ IK+A+A+++ P +L GE GV+E AR+ D+ +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH +K+LPADSEHSAIFQC+Q Sbjct: 2 KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQLNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.891e-54 Identity = 102/160 (63.75%), Postives = 131/160 (81.88%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQ Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.891e-54 Identity = 102/160 (63.75%), Postives = 131/160 (81.88%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQ Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.891e-54 Identity = 102/160 (63.75%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++ L Q+++F+PQ+VA+ +E LD++K A+A+++ +P ++AG GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+Q Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.098e-53 Identity = 105/161 (65.22%), Postives = 128/161 (79.50%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K IS+LGSTGSIGTQTLDIV H D F+VV LAAG N+ LLA QV F+P++VA+R L+++K A+A + + +P + GE+GV+E AR+ DA +VVTGIVGCAGL PT+AAI AGKDIALANKETLIAG P VLPL K +K+LPADSEHSAIFQC+Q Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQPMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVVLPLVEKMGVKLLPADSEHSAIFQCLQ 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 4.174e-53 Identity = 99/160 (61.88%), Postives = 132/160 (82.50%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K +++LGSTGSIGTQTLDIVA++ D+FRVV LAAG N+ L Q+++F+P++V++ + L E++ ALA++ +KP+++AGE G+ A + DA VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+Q Sbjct: 20 KALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQFQPEIVSIADPEQLPELEAALADLPQKPQLVAGEAGIAAVAAYGDAEVVVTGIVGCAGLVPTIAAIKAGKDIALANKETLIAGGPVVLPLLQEYGVKLLPADSEHSAIFQCLQ 179
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 4.174e-53 Identity = 99/158 (62.66%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 I++LGSTGSIGTQTLD+VA++ ++FRVV L + SN+TLLA+QV RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ +K++P DSEHSAIFQC+Q Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLPELRSLLTGMRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVKLIPVDSEHSAIFQCLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 4.615e-52 Identity = 96/158 (60.76%), Postives = 127/158 (80.38%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 I++LGSTGSIGTQTLD+VA++ ++F+VV L + SN+ LLA+QV+RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ + ++P DSEHSAIFQC+Q Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFQVVGLTSYSNVALLAEQVRRFRPQMVAIGREELLPELRSLLTGIRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVNLIPVDSEHSAIFQCLQ 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 6.237e-49 Identity = 97/162 (59.88%), Postives = 128/162 (79.01%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE--EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I+VLGSTGSIGTQTL+I +E DKF+ VAL+AG NITLL +QVK KP+VVA+ +E+L++++K+ + N++ P +L G++G+ A A TV+TGIVGCAGL PT++AI AGK+IALANKETLIA GP V+P K+N ++LPADSEHSAIFQC+Q Sbjct: 2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLDLDSAPLVLGGKEGINAVAAWDKADTVITGIVGCAGLIPTMSAINAGKNIALANKETLIAAGPIVIPALKKNNSRLLPADSEHSAIFQCLQ 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_GLOVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Gloeobacter violaceus GN=dxr PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 5.838e-47 Identity = 92/160 (57.50%), Postives = 119/160 (74.38%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I++LGSTGSIGTQTLDIVAE+ ++F V + A SN+ LLA+Q++RF+PQVVAV +E+ + LA + PE+ GE+G A A VVTGIVGCAGL PT+AA++AG+D+ALANKETL+AGGP V+P +K+LP DSEHSAIFQC+Q Sbjct: 2 KHIALLGSTGSIGTQTLDIVAEYPERFAVTGMTAHSNMELLAEQIRRFRPQVVAVGSEARRAALAALLAGFDGMPEMFVGEKGCCTVASQAPAEVVVTGIVGCAGLMPTLAAVDAGRDLALANKETLVAGGPVVMPRIRARGVKLLPVDSEHSAIFQCLQ 161 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |