FC876235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_RHIE6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhizobium etli (strain CIAT 652) GN=dxr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.184e-23 Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 7 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 P+ +S+ GSTGSIG TL++V EH D F + L N+ LLA Q K ++ ++ D +K AL+ + +G+ G++EAA +A V+ IVG AGL PT+AA G DIALANKE L++ G L + ++LP DSEH+AIFQ ++ Sbjct: 8 PRRLSIFGSTGSIGRNTLNVV-EHLGGRDNFEISVLTGNGNVELLARQAKASGARLAVTASDRHYDSLKSALSG--SGIAVASGKSGLMEAA-DCEADWVMAAIVGTAGLAPTLAAARRGADIALANKECLVSAGDLFLKSIREGGGRLLPVDSEHNAIFQVLE 167
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_EHRRW (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ehrlichia ruminantium (strain Welgevonden) GN=dxr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.184e-23 Identity = 64/160 (40.00%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +S+ GSTG+IG +D++ D ++V AL A SN+ LLA Q K ++V + + L E+K+ L K I G+ G ++ A + V+ IVG A L P V I AG K IALANKE+++ GG + LA + N+ ++P DSEH+AIFQ + Sbjct: 2 KTVSIFGSTGAIGQMIIDVILASSDSYQVKALVAKSNVQLLAFQAKIVNAEMVVIADVGLYKELKDLLFGTNVK--ISVGDVG-MQMAASLNVDYVMMAIVGIAALVPMVYLISAGVKVIALANKESVVCGGTLLFNLAREKNVNVIPVDSEHNAIFQIL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_MYCPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium paratuberculosis GN=dxr PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 + VLGSTGSIGTQ L ++A + D+F VV LAAG +N+ TLL + + V N ++ DE A + P G + +A V+ +VG GL+PT+AA+E+G +ALANKE+LIAGGP VL A +I+P DSEHSA+ QC++ Sbjct: 16 VLVLGSTGSIGTQALQVIAANPDRFEVVGLAAGGANLDTLLRQRAE------TGVTNVAVADE--HAARRAGDIP--FCGPEAATRLVEETEADVVLNALVGALGLRPTLAALESGARLALANKESLIAGGPLVLAAAAPG--QIVPVDSEHSALAQCLR 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_MYCA1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium avium (strain 104) GN=dxr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 + VLGSTGSIGTQ L ++A + D+F VV LAAG +N+ TLL + + V N ++ DE A + P G + +A V+ +VG GL+PT+AA+E+G +ALANKE+LIAGGP VL A +I+P DSEHSA+ QC++ Sbjct: 16 VLVLGSTGSIGTQALQVIAANPDRFEVVGLAAGGANLDTLLRQRAE------TGVTNVAVADE--HAARRAGDIP--FCGPEAATRLVEETEADVVLNALVGALGLRPTLAALESGARLALANKESLIAGGPLVLAAAAPG--QIVPVDSEHSALAQCLR 163
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CORGL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Corynebacterium glutamicum GN=dxr PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.020e-23 Identity = 69/163 (42.33%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKR--FKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I +LGSTGSIGTQ LD++A++ DKF VV +AA GS L+ Q ++ VAV + I +AL EI++G A TV+ +VG GL T+A +E+G +ALANKE+L+AGG FV A +I+P DSEHSA+ QC++ Sbjct: 6 KKILILGSTGSIGTQALDVIADNSDKFEVVGIAAGGSQPDLVISQAQQLGLAADKVAVADAQAAAVISKALGG-----EIISGTDAAKILVETTKADTVLNALVGSLGLAATLATLESGAHLALANKESLVAGGEFVTSKAKLG--QIIPVDSEHSAMAQCLR 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_PSYA2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=dxr PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 16 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 I+VLG+TGSIG TL I+A + V AL+ + L ++F P+ V V ++ D+ + L+ E++ G+ G+++ A TVV IVG AGL T+AA AGK I LANKE L+ G ++ H+ +LP DSEH+AIFQC+ Sbjct: 7 IAVLGATGSIGDSTLAILAAQPQYYDVYALSGYHRLDKLLALCQQFAPKRVGVPTTAV-DDFAKRLSAAGLDIEVVGGDAGLVDIATDSQTDTVVAAIVGAAGLPSTLAAARAGKRILLANKEALVMAGQVMINAVKTHHATLLPLDSEHNAIFQCL 162
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_EHRCJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ehrlichia canis (strain Jake) GN=dxr PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 K +SV GSTG+IG +DI+ DK++V L A SNI LLA Q K + V + + +L E+K+ L + K + AG+ G+I A D + IVG A L P I + K IALANKE+++ GG +L LA + ++KI+P DSEH+AI+Q + Sbjct: 2 KTVSVFGSTGAIGQMIIDIIFSELDKYQVKVLVAKSNIQLLAFQAKLVNAERVVITDVNLYRELKDLLLDTNIK--VSAGDDGMI-MATSLDVDYAMMAIVGIAALVPMTYLINSNVKVIALANKESIVCGGALLLSLAKEKDVKIIPLDSEHNAIYQIL 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CORGB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Corynebacterium glutamicum (strain R) GN=dxr PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 68/163 (41.72%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKR--FKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K I +LGSTGSIGTQ LD++A++ DKF VV +AA GS L+ Q ++ VAV + + +AL EI++G A TV+ +VG GL T+A +E+G +ALANKE+L+AGG FV A +I+P DSEHSA+ QC++ Sbjct: 6 KKILILGSTGSIGTQALDVIADNSDKFEVVGIAAGGSQPDLVISQAQQLGLAADKVAVADAQAAAVVSKALGG-----EIISGTDAAKILVETTKADTVLNALVGSLGLAATLATLESGAHLALANKESLVAGGEFVTSKAKLG--QIIPVDSEHSAMAQCLR 161
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_CARHZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dxr PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 69/163 (42.33%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 10 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE---ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 489 K + +LGSTGSIG Q+L+++ DKF VVALAA N LL +Q RFK V++ L DE E K + G + ++ A P ++T I G L PT+ A++AGK I LANKET++A G + PL K +LP DSEHSAIFQ ++ Sbjct: 2 KKLVILGSTGSIGRQSLEVIEFFPDKFSVVALAAAKNGKLLLEQCLRFK-----VKHAFLADEESYKTYYQEFKNHGILLTTGSKELLNLALLPGVDGIITAIPGTICLLPTIEALKAGKIIYLANKETMVAAGEIITPLM-KLGENLLPVDSEHSAIFQALR 158
BLAST of FC876235 vs. ExPASy Swiss-Prot
Match: DXR_SHEWM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxr PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.446e-23 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 22 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 486 +LG+TGSIG TL ++A + + + V AL A +N+ + ++++P+V + +E ++E L+ K E+ GE + TV+ IVG AGL PT+AA++AGK + LANKE+L+ G + K ++LP DSEH+AIFQ + Sbjct: 6 ILGATGSIGASTLSVIASNPETYSVYALVANTNVDKMMALCEQYRPKVAHMVDEQAAKSLQERLSP-SLKIEVTTGESQLESIVTSSCVDTVMAAIVGAAGLVPTLAAVKAGKRVLLANKESLVMSGRLFIEEMKKSGAQVLPVDSEHNAIFQAL 159 The following BLAST results are available for this feature:
BLAST of FC876235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876235 ID=FC876235; Name=FC876235; organism=Citrus clementina; type=EST; length=489bpback to top |