FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEPW (Malate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.500e-22 Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_AERHH (Malate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.500e-22 Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKNRLPAGSELSLYDIAPVTPGVAVDLSHIPTDVKVKGFCGEDP-SPALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.489e-22 Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 K+AVLGAAGGIGQ LA+L+K+ P S L LYD+ TPGV AD+SH+ T ++GF G+ + AL D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPIP-ALENADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_ENTS8 (Malate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdh PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.109e-21 Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T+ ++GF G+ + AL G D+V+I AGV RKPGM R DLFN+NAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDA-KPALEGADVVLISAGVARKPGMDRSDLFNVNAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHESW (Malate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHESR (Malate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHESM (Malate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHESH (Malate dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEPC (Malate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEPA (Malate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |