FC876238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEON (Malate dehydrogenase OS=Shewanella oneidensis GN=mdh PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEAM (Malate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V+GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_PSYIN (Malate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 K+AVLGAAGGIGQ LA+L+K++ P S+L LYD+ TPGV D+SH+ T+ V GF G A+ G D+++I AGV RKPGM R DLFNINAG Sbjct: 2 KIAVLGAAGGIGQALALLLKLDLPANSILSLYDLAPVTPGVAKDLSHIPTSVKVEGFAGTDPTA-AIEGADVILISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T V GF G L +AL DIV+IPAG+PRKPGM R DLFN+NAG Sbjct: 2 KVAVLGAAGGIGQALSLLLKTGLPAGSELSLYDVAPVVPGVAVDLSHIPTAVKVAGF-GADALNEALKDADIVLIPAGMPRKPGMDRADLFNVNAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHESA (Malate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEB9 (Malate dehydrogenase OS=Shewanella baltica (strain OS195) GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSHLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEB8 (Malate dehydrogenase OS=Shewanella baltica (strain OS185) GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSHLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEB5 (Malate dehydrogenase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSHLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96
BLAST of FC876238 vs. ExPASy Swiss-Prot
Match: MDH_SHEB2 (Malate dehydrogenase OS=Shewanella baltica (strain OS223) GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 208 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAG 489 KVAVLGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFNINAG Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSHLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAG 96 The following BLAST results are available for this feature:
BLAST of FC876238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876238 ID=FC876238; Name=FC876238; organism=Citrus clementina; type=EST; length=491bpback to top |