FC876245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 2 Query: 308 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 T+ VS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PEL Sbjct: 38 TKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 115
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 380 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 380 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 380 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 344 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P+RP + P S P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+ Sbjct: 52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEI 117
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.618e-12 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 2 Query: 308 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 ++SVS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PEL Sbjct: 30 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 107
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12 Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 302 AGTRSVSVSAAAA------DPNRPLWF-PGST-PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 AGT+ + A + P+R W P ST P +L G PGD+G+D GL +DPET + + E++H RWA+LGA GI PEL Sbjct: 22 AGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPEL 107
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.299e-11 Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 2 Query: 344 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P+R L+ PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PEL Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.299e-11 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 380 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+ Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 117
BLAST of FC876245 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.299e-11 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 2 Query: 380 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEL 535 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+ Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 89 The following BLAST results are available for this feature:
BLAST of FC876245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876245 ID=FC876245; Name=FC876245; organism=Citrus clementina; type=EST; length=537bpback to top |