FC876248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.669e-19 Identity = 61/185 (32.97%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 83 LYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP------------SLRKSGAG-------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 559 L+VG+L NV +QL LF G V V V D T RS G+G+V S+ E A + N L+G+P+RV P S SG+G +++ NL +D AL FS G ++ +V D +G+SKG+GFV +D+ + Q AI+ L+G L+ +Q+ V Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRV 277
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_DROSU (Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.799e-18 Identity = 49/154 (31.82%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++TD +LY LF +G + + R+ RD T S GY +V+F++ ++ RA+++LN + K ++V Y+ P N+++ NL + I L F +G+I+ + D L G+ +G FV+++ E AQ+AI LN ++ Sbjct: 127 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 278
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.799e-18 Identity = 49/154 (31.82%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++TD +LY LF +G + + R+ RD T S GY +V+F++ ++ RA+++LN + K ++V Y+ P N+++ NL + I L F +G+I+ + D L G+ +G FV+++ E AQ+AI LN ++ Sbjct: 125 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVI 276
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++TD +LY LF G + + R+ +D T S GY +V+F++ +A A++ LN + K ++V Y+ P N+++ NL + I L F +GNI+ + D L G+ +G FV+F+ E AQ+AI LN ++ Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 236
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17 Identity = 49/154 (31.82%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLN-GQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++ D +LY LF +G + + R+ RD T S GYG+V+F + +A RA+ LN + K I+V ++ P + N+++ NL ++I + L F +G I+ + D + G +G F++F+ E AQ+AI LN ++ Sbjct: 78 TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFAR--PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVI 229
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 53/170 (31.18%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 80 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPS-----LRKSG------AGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAT-DLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQV 553 +++VG L ++ D L F +G V+ RV + T RS GYGYV+F N A +A++ + ++G+PI S P+ +K G + +F+ NL D A+ + F+ G ++S ++ T Q KG+G+VQF N E A+KA++ L G ++++ V Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPV 338
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: ELAV_DROVI (Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 53/166 (31.93%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLST-------------RRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNG--QSKGYGFVQFDNEESAQKAIEKLNG 529 T+L V L +T+ ++ LF+ +G++ SV++ RD S +SLGYG+VN+ Q+A +A+ +LN L K I+V ++ PS N+++ L K + + L F+ FG I++ ++ + Q+KG GF++FD E A +AI LNG Sbjct: 185 TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: ELAV_DROME (Protein elav OS=Drosophila melanogaster GN=elav PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 53/166 (31.93%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLST-------------RRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNG--QSKGYGFVQFDNEESAQKAIEKLNG 529 T+L V L +T+ ++ LF+ +G++ SV++ RD S +SLGYG+VN+ Q+A +A+ +LN L K I+V ++ PS N+++ L K + + L F+ FG I++ ++ + Q+KG GF++FD E A +AI LNG Sbjct: 149 TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++TD +LY LF G + + R+ +D T S GY +V+F++ +A A++ +N + K ++V Y+ P N+++ NL + I L F +GNI+ + D L G+ +G FV+F+ E AQ+AI LN ++ Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVI 253
BLAST of FC876248 vs. ExPASy Swiss-Prot
Match: SXL_CERCA (Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 77 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGML 535 T+L V L ++TD +LY LF +G + + R+ RD T S GY +V+F+ ++ RA++ LN + K ++V Y+ P N+++ NL + I L F +G I+ + D L G+ +G FV+F+ E AQ+AI LN ++ Sbjct: 110 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVI 261 The following BLAST results are available for this feature:
BLAST of FC876248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876248 ID=FC876248; Name=FC876248; organism=Citrus clementina; type=EST; length=654bpback to top |