FC876256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.520e-14 Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 3 Query: 228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 +F++A+ AEF+A I + + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITF 168
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14 Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 3 Query: 228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 +F++A+ AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF Sbjct: 33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITF 168
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14 Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 3 Query: 228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 +F++A+ AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVG-GLGVTTVHGNLTAGHGLLVELIITF 171
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.606e-13 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 +F++A+ AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + R++S+ ++V Y+ AQCLGAI G G++ G G + S G GL E+I TF Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLSAGHGLLVELIITF 168
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 228 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 +F++A+ AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITF 168
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 E T +A +AEFI+ I Y T+ DG A G++ + A +FV V A ISGGH+NPAVTFG F+ ++L+R ++Y++AQ LG+I L+ S +G L++G G L EI+ TF Sbjct: 13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTF 152
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 237 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTF 659 RA +AEFI+ I + TD +G+ +A AFG +FV V A ISGGH+NPAVTFG+ L ++L+R ++Y +AQ LG+++ F S+ T GG A G S GVG L EI+ TF Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTP--SGLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAA-----CFLLSFAT---GGEPIPAFGLSAGVGSLNALVFEIVMTF 154
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 369 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 IA+ FG ++ L +SG HINPAVT GL + VS+++ Y+V+QC+GAI+G ++KA S G G +A G STG G+ E + TF Sbjct: 57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITF 152
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12 Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 213 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTF 659 EL+ +A +AEFI+ + + TD G G++ + A +FV V A ISGGH+NPAVTFG F+ +SLV+AV+Y VAQ LG++ L+K GGA A S GVG + EI+ TF Sbjct: 13 ELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGG----GTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIAT--------GGAAVGAFSLSAGVGAWNAVVFEIVMTF 153
BLAST of FC876256 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 351 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA-------FQKSYYTRYGGGANELADGYSTGVGLAAEIIGTF 659 G+G+LG+++AFG + + Y GISGGH NPAV+ GL +A +V V Y++AQ GAI ++ FQ + G G + GYS L E++ TF Sbjct: 33 GIGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHS-PGGYSLTAALVTEVVMTF 141 The following BLAST results are available for this feature:
BLAST of FC876256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876256 ID=FC876256; Name=FC876256; organism=Citrus clementina; type=EST; length=660bpback to top |