FC876288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.415e-11 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEHM 122 +QRA+GPATVLAI T PA+ V QADYPDYYF+ITKS+HM Sbjct: 13 AQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHM 52
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.415e-11 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEHM 122 +QRA+GPATVLAI T PA+ V QADYPDYYF+ITKS+HM Sbjct: 13 AQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHM 52
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.531e-11 Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 3 Query: 9 RADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEHM 122 RADGPAT+LAI T P +++ QADYPDYYFR+TKSEHM Sbjct: 12 RADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHM 49
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.531e-11 Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEHM 122 +QRA GPATVLAI T P++ + QADYPDYYFRITKS+HM Sbjct: 10 AQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHM 49
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.836e-11 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEH 119 +QRA+GPAT+LAI TV PA+ VNQ+ YPDYYFRIT SEH Sbjct: 10 AQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEH 48
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.836e-11 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEH 119 +QRA+GPAT+LAI TV PA+ VNQ+ YPDYYFRIT SEH Sbjct: 10 AQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEH 48
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.836e-11 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEH 119 +QRA+GPAT+LAI TV PA+ VNQ+ YPDYYFRIT SEH Sbjct: 10 AQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEH 48
BLAST of FC876288 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.836e-11 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 3 SQRADGPATVLAIRTVAPAHSVNQADYPDYYFRITKSEH 119 +QRA+GPAT+LAI TV PA+ VNQ+ YPDYYFRIT SEH Sbjct: 10 AQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEH 48 The following BLAST results are available for this feature:
BLAST of FC876288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876288 ID=FC876288; Name=FC876288; organism=Citrus clementina; type=EST; length=122bpback to top |