FC876289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEH1_YEAST (Nucleoporin SEH1 OS=Saccharomyces cerevisiae GN=SEH1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 91 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA 480 Q ++GH+D VHDV D+YG+ +AT SSD IK+ + +TS S H ++ + WA P++G I+AS S+D TV +W+E E W K D K S+ S+ +AP LGL LAC +DG + ++ A Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 139
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: SEH1_SCHPO (Nucleoporin seh1 OS=Schizosaccharomyces pombe GN=seh1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.211e-16 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG--AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN----EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG 492 I+T H+D V+DV D+YG+R+ + S+D +K+ ++T G ++ VAWAHP FG +LA CS D V I++E N W++ D +S+V I + P + G LA S+D + ++ A G Sbjct: 9 IQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPG 146
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSW 552 + GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V V+W+ K GS+LA+CS D +V +W+ +E+ V H V ++W PHE LA S D I ++ AD W + +H V S+S+ Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS--KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHE--DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISF 203 HSP 2 Score: 70.0922 bits (170), Expect = 1.173e-11 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 L+GH+G W W HPK G++LA+C D T+ IW E S W+ V D H ++ + W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S Sbjct: 10 LTGHRGRAWGAGW-HPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSP--CGQYLASASFDATVAIWDKKS-GEFECNATLEGHENEVKSVSWSKS 115
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_CULQU (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Culex quinquefasciatus GN=Ciao1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13 Identity = 50/161 (31.06%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 82 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPS 561 +P + GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V V+W+ K G++LA+CS D +V IW+ +E+ V H V ++W P+E LA S D I ++ AD W + +H V S+++ S Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNE--DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDAS 206 HSP 2 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 567 LSGH+G VW W HP+ +LA+C D T+ IW + + W+ V D H ++ + W+P G LA S D ++++ R+ G ++ + + H V SVSW+ S A Sbjct: 10 LSGHRGRVWGAGW-HPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSP--CGRFLASASFDATVAIWDRRS-GEFECNATLEGHENEVKSVSWSKSGA 117
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12 Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 232 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 L GHKG +W VAW HPK G++ ASC D + IW N N W + D HK ++ I W+P G LA S DG +++ +++ G ++ + + H V SVSW+ S Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-NGNTWTTKTILSDGHKRTIREIRWSP--CGQYLASASFDGTTAIW-SKSSGEFECNATLEGHENEVKSVSWSRS 114
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12 Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 ++ GH+ TV VA G LA+AS D + I N+ + L L GH+ V VAWA G++LA+CS D +V IW+ NE+ V H V + W P + LA S D N+ V+ D W+ + H V +++ PS Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ--ELLASCSYDNNVCVY-KEEDDDWECRATLEGHTSTVWGLTFDPS 205
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSW 552 + GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+ K G +LA+CS D +V IW+ +E+ V H V + W H LA S D I +F A D WD + +H V S+ + Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF 202 HSP 2 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 GH+ + VA G A+ D +I+I + GN+ S GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ + G LA S D ++ ++ D ++ + + H V V W P+ Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPT 159
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 46/153 (30.07%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 GH+ + VA G A+ D +I++ + NT LS GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ G LA S D ++ ++ D ++ + + AH V V W P+ Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPT 159
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 46/153 (30.07%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 GH+ + VA G A+ D +I++ + NT LS GHK + E+ W+ G LAS SFD T IW + +S E+ + E H++ V S+ W+ G LA S D ++ ++ D ++ + + AH V V W P+ Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS--PCGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPT 159
BLAST of FC876289 vs. ExPASy Swiss-Prot
Match: CIAO1_DROGR (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 48/153 (31.37%), Postives = 70/153 (45.75%), Query Frame = 1 Query: 106 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 561 GH+ + VA G A+ D +I+I NT LS GHK + EV W+ G LAS SFD T IW + N + E H++ V S+ W+ + G LA S D ++ ++ D ++ + + AH V V W PS Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWS--PCGEYLASASFDATTAIWSKHECNATL-----EGHENEVKSVSWS--QSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPS 155 The following BLAST results are available for this feature:
BLAST of FC876289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876289 ID=FC876289; Name=FC876289; organism=Citrus clementina; type=EST; length=665bpback to top |