FC876294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STAAC (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain COL) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_METJA (Carbamoyl-phosphate synthase small chain OS=Methanocaldococcus jannaschii GN=carA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 48/124 (38.71%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEM----SRSWDIVGIDLISDVSGQEP 360 SY GQ V+MT P GN GV D ES G V+R ++ ++ L ++L E +I GI D+DTR +TR++R G + L E SD E+ E+ R DI IDL+ VS +EP Sbjct: 45 SYKGQIVMMTYPLEGNYGVKKDWFESDGIKAEGFVVREVT--------SKALDDFLKEYDIPGIQDIDTRFLTRKIRDKGVVKSCLKVAEEISDDEISELLERVKRYSDISDIDLVPLVSTKEP 160
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_ARCFU (Carbamoyl-phosphate synthase small chain OS=Archaeoglobus fulgidus GN=carA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL---IGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQE 357 SY GQ ++MT P IGN GVN +D ES + G V++ L SNWR ++ L + ++ GI VDTR +TR++R GS+ IG+ + K ++ +E I IDL+ V +E Sbjct: 45 SYKGQILMMTYPLIGNYGVNREDFESDGVKVEGFVVKELCKNPSNWRSEMSVDELLKQYDVPGIEGVDTRMLTRKIRIYGSMKAAIGIGDVDREKLVRKAVEQP---FISDIDLVDKVCVKE 163
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRP8 (Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes serotype M18 GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ + T P IGN G+N DD ES G+V+ +S SNWR TL +L + I GIS +DTRA+T+ +RQ G++ ++ ++ S Q L + R+ Sbjct: 46 SYNGQILTFTYPLIGNYGINRDDYESISPTCKGVVVSEVSRLASNWRKQMTLDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMA-DDGDSIQHLKDQLRA 147
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRP6 (Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes serotype M6 GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ + T P IGN G+N DD ES G+V+ +S SNWR TL +L + I GIS +DTRA+T+ +RQ G++ ++ ++ S Q L + R+ Sbjct: 46 SYNGQILTFTYPLIGNYGINRDDYESISPTCKGVVVSEVSRLASNWRKQMTLDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMA-DDGDSIQHLKDQLRA 147
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRP3 (Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes serotype M3 GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ + T P IGN G+N DD ES G+V+ +S SNWR TL +L + I GIS +DTRA+T+ +RQ G++ ++ ++ S Q L + R+ Sbjct: 46 SYNGQILTFTYPLIGNYGINRDDYESISPTCKGVVVSEVSRLASNWRKQMTLDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMA-DDGDSIQHLKDQLRA 147
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRP1 (Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes serotype M1 GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ + T P IGN G+N DD ES G+V+ +S SNWR TL +L + I GIS +DTRA+T+ +RQ G++ ++ ++ S Q L + R+ Sbjct: 46 SYNGQILTFTYPLIGNYGINRDDYESISPTCKGVVVSEVSRLASNWRKQMTLDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMA-DDGDSIQHLKDQLRA 147
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRMU (Carbamoyl-phosphate synthase small chain OS=Streptococcus mutans GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTE 267 SY GQ + T P +GN G+N DD ES + G+V+ + +NWR TL +L +NI GIS +DTRA+T+ +R G++ L+ E Sbjct: 46 SYNGQILTFTYPLVGNYGINRDDYESIKPTCKGVVVSENARRANNWRKQMTLDEFLKSKNIPGISGIDTRALTKIIRHHGTMKATLANE 134
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_DEIRA (Carbamoyl-phosphate synthase small chain OS=Deinococcus radiodurans GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTE----------ESKSDQELLEMSRS---WDIVGIDLISDVSGQEPF 363 SY GQ V +T PH+GN GV D ES + ++ G + R S SN+R ++L ++ + ++ I +DTRA+ RRLR G + GV++ E +E + + R+ DI G D+ +V+ P+ Sbjct: 49 SYNGQIVTITYPHVGNYGVAIYDMESNKPYVRGFISREFSGEYSNYRAQQSLEAFMQQYGVVSIQGIDTRALVRRLRSGGVVKGVIAHRSFTHPEDPYGEFTPAEEQIYVQRARDHQDIDGFDMTKEVTTALPY 182
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STRA5 (Carbamoyl-phosphate synthase small chain OS=Streptococcus agalactiae serotype V GN=carA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ + T P IGN G+N DD ES + G+VI + SNWR TL +L + I GIS +DTRA+T+ +R+ G++ L E + + L + +S Sbjct: 45 SYNGQIITFTYPLIGNYGINRDDYESIRPTCKGVVIYEWAEYPSNWRQQMTLDEFLKLKGIPGISGIDTRALTKIIRKHGTMKACLINEGNSIHEALENLQKS 147 The following BLAST results are available for this feature:
BLAST of FC876294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876294 ID=FC876294; Name=FC876294; organism=Citrus clementina; type=EST; length=420bpback to top |