FC876297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.701e-77 Identity = 134/175 (76.57%), Postives = 149/175 (85.14%), Query Frame = 2 Query: 131 IHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 +H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT GGGDD+FNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+D+ LDR RKLAD CTGLQGFL+F++ VDYGKK KL F VYP+PQVST+V Sbjct: 1 MHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAV 175
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 8.688e-76 Identity = 133/181 (73.48%), Postives = 151/181 (83.43%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECISIH+GQAG+Q+GN+CWELYCLEHGIQPDGQMPSDKTVG +D+FNTFF+ETG+GKHVPRAVFVDLEP+VIDEVR+G YRQLFHPEQLISGKEDAANN+ARGHYTIGKE VD+ LDRIRKLAD CTGLQGFL+F + V+YGKK KL +YP+PQ +TSV Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.443e-71 Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIH+GQAG Q+GNACWELYCLEHGI+PDG++ +KT DD F+TFFSETG+GK+VPR+++VDLEP VID+VRTGTYR LFHPEQLI+GKEDAANN+ARGHYT+GKE++D LDRIR++ADNCTGLQGFLVF++ VDYGKK KL F+VYP+PQVSTSV Sbjct: 1 MREVISIHVGQAGTQIGNACWELYCLEHGIEPDGRLSPEKTTKPLDDGFSTFFSETGSGKYVPRSIYVDLEPNVIDQVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKELIDHVLDRIRRVADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTSV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.215e-69 Identity = 119/181 (65.75%), Postives = 149/181 (82.32%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIH+GQAG+Q+GNACWELYCLEHGIQPDG MP+ T G ++F TFFS+TG+G++VPR++FVDLEPTV+DE+RTGTY++LFHPEQ+I+GKEDAANN+ARGHYT+GKE++D LDRIR+LADNC+GLQGF VF++ VDYGKK KL F++YP+PQVST+V Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.535e-69 Identity = 121/181 (66.85%), Postives = 142/181 (78.45%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG GKHVPRAV VDLEPTV+DEVR GTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE +DL LDRIRKL D C+GLQGFL+F++ +DYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.535e-69 Identity = 121/181 (66.85%), Postives = 142/181 (78.45%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG GKHVPRAV VDLEPTV+DEVR GTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE +DL LDRIRKL D C+GLQGFL+F++ +DYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA8_HUMAN (Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.535e-69 Identity = 120/181 (66.30%), Postives = 142/181 (78.45%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG GKHVPRAV +DLEPTV+DEVR GTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE +DL LDRIRKL D C+GLQGFL+F++ +DYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.292e-68 Identity = 120/181 (66.30%), Postives = 141/181 (77.90%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG GKHVPRAV VDLEPTV+DEVR GTYR LFHPEQLI+GKEDAANN+ARGHYT+GKE +DL LDRIRKL D C+GLQGFL+F++ +DYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKIHDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRHLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.485e-67 Identity = 122/181 (67.40%), Postives = 139/181 (76.80%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE +SIHIGQAGIQVGNACWELYCLEHGI PDG + D DDAF+TFFSET GK VPR VF+DLE VIDEV+ G Y+ L+HPEQLI G EDAANN+ARGHYTIGKEI+++ LDRIRKL +NC+GLQGFL+FN+V +DYGKK KLGFTVYPSPQVST+V Sbjct: 1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 6.900e-65 Identity = 115/181 (63.54%), Postives = 140/181 (77.35%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIH+GQAG Q+GNACWELYCLEHGIQP+G M + D F+TFFSETG GK+VPR+++VDLEP VID+VRTG YR LFHPEQLI+GKEDA+NN+ARGHYT+GKE+VD D+IR++ADNC+GLQGFLVF++ ++Y KK KL F+VYP+PQVSTSV Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSV 181 The following BLAST results are available for this feature:
BLAST of FC876297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876297 ID=FC876297; Name=FC876297; organism=Citrus clementina; type=EST; length=655bpback to top |