FC876297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 7.337e-83 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIH+GQ GIQ+GNACWELYCLEHGIQPDG MPSDK +G DDAFNTFFSETGAGKHVPRAVF+DLEP+V+DEVRTGTYRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL F+AV VDYGKK KLGFT+YPSPQ+ST+V Sbjct: 1 MREIISIHLGQGGIQIGNACWELYCLEHGIQPDGSMPSDKAIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPSVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLAFHAVGGGTGSGLGRLLLERLSVDYGKKSKLGFTIYPSPQISTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_BOMMO (Tubulin alpha chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 9.583e-83 Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRA+FVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++ VDYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRALFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA1_PARLI (Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.252e-82 Identity = 140/181 (77.35%), Postives = 158/181 (87.29%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE++D+ LDRIRKLAD CTGLQGFL+F++ VDYGKK KL F VYP+PQ+ST+V Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.635e-82 Identity = 147/181 (81.22%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE IS+HIGQ GIQVGNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV VDLEPTV DE+RTGTYRQLFHPEQ+ISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGF+ F++V VDYGKK KL FTVYPSPQVST+V Sbjct: 1 MREVISVHIGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVLVDLEPTVCDEIRTGTYRQLFHPEQIISGKEDAANNFARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFIGFHSVGGGTGSGLGSLLLERLSVDYGKKSKLCFTVYPSPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.635e-82 Identity = 147/181 (81.22%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIHIGQAGIQVGNACWELYCLEHGI+ DG MPSD +VG DAFNTFFSETG+GKHVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKK KLGFT+YPSPQVST+V Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEHDGTMPSDSSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.635e-82 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+A VDYG+K KL F + P+PQV+T+V Sbjct: 1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.135e-82 Identity = 143/181 (79.01%), Postives = 158/181 (87.29%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDG MPSDKTVGGGDD+F+TFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ LDRIRKLAD CTGLQGFLVF++ VDYGKK KL F++YP+PQVST+V Sbjct: 1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.135e-82 Identity = 140/181 (77.35%), Postives = 159/181 (87.85%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEP+V+DEVR+GTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE++DL LDRIRKLAD CTGLQGFL+F++ VDYGKK KL F+VYP+PQVST+V Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.788e-82 Identity = 148/181 (81.77%), Postives = 154/181 (85.08%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRE ISIHIGQAGIQVGNACWELYCLEHGIQ DG MPSD TVG DAFNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCL R+R+LADNCTGLQGFLVFNAV VDYGKK KLGFT+YPSPQVST+V Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIQQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLGRVRQLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAV 181
BLAST of FC876297 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 4.756e-82 Identity = 141/181 (77.90%), Postives = 157/181 (86.74%), Query Frame = 2 Query: 113 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKXKLGFTVYPSPQVSTSV 655 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRA+FVDLEP+VIDEVRTGTYRQLFHPEQLISGKEDAANN+ARGHYTIGKEI+D LDR+RKLAD CTGLQGFLVF++ VDYGKK KL F +YP+PQVST+V Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFVDLEPSVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLDRMRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 181 The following BLAST results are available for this feature:
BLAST of FC876297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876297 ID=FC876297; Name=FC876297; organism=Citrus clementina; type=EST; length=655bpback to top |