FC876306

Overview
NameFC876306
Unique NameFC876306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.084e-58
Identity = 108/140 (77.14%), Postives = 123/140 (87.86%), Query Frame = 2
Query:   26 ESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            E R AQRA+GPATVLAIGTATP + V+Q+ Y DYYFRIT SE   ELKEKF+RMC+KSMI  RYM+LTE++LK+NP+ C YMA SLDARQDIVV EVPKLGKEAA +AIKEWG+PKSKITHLIFCTTSGVDMPGAD++LT
Sbjct:    6 EFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLT 145          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.351e-57
Identity = 100/137 (72.99%), Postives = 122/137 (89.05%), Query Frame = 2
Query:   32 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL 442
            R  QRA+GPATVLAIGTA P + ++Q+ Y DYYFR+T SEHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L
Sbjct:    8 RKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYEL 144          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 3.009e-57
Identity = 100/137 (72.99%), Postives = 121/137 (88.32%), Query Frame = 2
Query:   32 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL 442
            R  QRA+GPATVLAIGTA P + V+Q+ Y DYYFR+T  EHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L
Sbjct:    8 RKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYEL 144          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHS2_HORVU (Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 6.704e-57
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 2
Query:   23 QESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            +E R AQRA+G ATVLAIGTA PA+ V QA YPDYYFR+TKSEH+ +LKEKF+RMCDKSMI+KR+M+LTEEIL +NP +CA+M  SLDAR  I + EVPKLG+ AA KAIKEWGQP SKITHL+FCTTSGVDMPGADYQLT
Sbjct:    7 KEVRMAQRAEGLATVLAIGTAVPANCVYQATYPDYYFRVTKSEHLADLKEKFQRMCDKSMIRKRHMHLTEEILIKNPKICAHMETSLDARHAIALVEVPKLGQGAAEKAIKEWGQPLSKITHLVFCTTSGVDMPGADYQLT 147          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 9.681e-56
Identity = 103/137 (75.18%), Postives = 117/137 (85.40%), Query Frame = 2
Query:   32 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL 442
            R A RA G AT+LAIGTATP + V QADY DYYFR+TKSEHM +LKEKFKR+C+K+ IKKRY+ LTE+ L+ENP MC +MAPSL+ARQD+VV  VP LGKEAA KAI EWG PKSKITHLIFCTT+GVDMPGADYQL
Sbjct:   13 REAGRAQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQL 149          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.264e-55
Identity = 104/138 (75.36%), Postives = 115/138 (83.33%), Query Frame = 2
Query:   32 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            R AQRA+GPATVLAIGTA PA+   Q+ YPD+YF IT S+HMTELK KF RMC KS IKKRYM+L  EILK NP++CAY   SLD RQDI V EVPKLGKEA+ KAIKEWGQPKSKITHL+FCTTSGVDMPGAD+ LT
Sbjct:   14 RLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYMHLNSEILKANPSLCAYWEKSLDVRQDIAVVEVPKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALT 151          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.651e-55
Identity = 101/141 (71.63%), Postives = 121/141 (85.82%), Query Frame = 2
Query:   23 QESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            +E R AQRA+GPATVLAIGTA P++ V+Q+ YPD+ FRIT S+H TELKEKFK MC+ SMIKKRY++LTEEILK NPN+C + APSL+ARQ+I VAE PKLGK AA KAI+EW Q KSKITHL+FCTT+ V++PGADYQLT
Sbjct:    5 EEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYLHLTEEILKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAAQKAIEEWSQSKSKITHLVFCTTTSVELPGADYQLT 145          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.679e-55
Identity = 98/141 (69.50%), Postives = 119/141 (84.40%), Query Frame = 2
Query:   23 QESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            +E R AQ+++GPA +LAIGTATP +   QADYPDYYF+ITKSEHMTELK+KFK +C+KSMI+KR+M  ++E LK NP +C +M  SL+ARQDI V E P++GKEAA KAIKEWG PKS ITHLIFCT++GVDMPGADYQLT
Sbjct:    5 KEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLT 145          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.070e-54
Identity = 96/135 (71.11%), Postives = 118/135 (87.41%), Query Frame = 2
Query:   38 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL 442
            AQRA+GPA +LAIGTATP H V+Q  YPDYYFR+T S+H+ +LKEKF+R+C K+MIKKR+M+LTEE+L++NP +C++  PSLD RQDI+V+E+PKLGKEAA KAI EWGQPKS ITHL+FCT SGVDMPGAD QL
Sbjct:   13 AQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHMFLTEELLRKNPTLCSHNEPSLDIRQDILVSEIPKLGKEAALKAIGEWGQPKSTITHLVFCTRSGVDMPGADCQL 147          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.061e-54
Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = 2
Query:   23 QESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            +E R AQ ++GPA +LAIGTA P +   QADYPDYYF++TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +C +M  SL+ARQDI V E P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT
Sbjct:    5 KEMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVCKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLT 145          
The following BLAST results are available for this feature:
BLAST of FC876306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS9_DAUCA2.084e-5877.14Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
THS3_ARAHY1.351e-5772.99Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
THS1_ARAHY3.009e-5772.99Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHS2_HORVU6.704e-5775.18Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=... [more]
2PS_GERHY9.681e-5675.182-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
CHSY_EQUAR1.264e-5575.36Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
CHSG_PETHY1.651e-5571.63Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
ACS2_RUTGR3.679e-5569.50Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
CHSB_PETHY1.070e-5471.11Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
ACS3_RUTGR9.061e-5468.09Probable acridone synthase 3 OS=Ruta graveolens GN... [more]

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Properties
Property NameValue
Genbank descriptionC32003B09EF DevOvary1 Citrus clementina cDNA clone C32003B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876306 ID=FC876306; Name=FC876306; organism=Citrus clementina; type=EST; length=456bp
TCTTGTACAAAGGTGGCCGTATCAAGAAAGCAGAAACGCTCAGCGTGCCG
ACGGACCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGT
GTCAACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGA
GCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGA
TGATTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAAC
CCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACAT
TGTGGTGGCCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACCAAGGCCA
TCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGC
ACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAACTG
ATCGGC
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