FC876310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876310 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.011e-52 Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 3 Query: 279 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENN+ Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNK 106 HSP 2 Score: 43.1282 bits (100), Expect = 1.011e-52 Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 2 Query: 599 ARVLVVCSEITAVTFRGPADTHLDS 673 ARVL+VCSE TAVTFRGP++T +DS Sbjct: 108 ARVLIVCSENTAVTFRGPSETDMDS 132
BLAST of FC876310 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.413e-47 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 3 Query: 363 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 78 HSP 2 Score: 54.299 bits (129), Expect = 4.413e-47 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDS 673 +GARVLVVCSE+TAVTFRGP+DTHLDS Sbjct: 78 KGARVLVVCSEVTAVTFRGPSDTHLDS 104
BLAST of FC876310 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.090e-33 Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 3 Query: 420 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 596 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 58 HSP 2 Score: 54.299 bits (129), Expect = 2.090e-33 Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDS 673 +GARVLVVCSE+TAVTFRGP+DTHLDS Sbjct: 58 KGARVLVVCSEVTAVTFRGPSDTHLDS 84
BLAST of FC876310 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.859e-17 Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 2 Query: 593 QGARVLVVCSEITAVTFRGPADTHLDS 673 +GARVLVVCSEITAVTFRGP+DTHLDS Sbjct: 25 KGARVLVVCSEITAVTFRGPSDTHLDS 51 HSP 2 Score: 53.9138 bits (128), Expect = 2.859e-17 Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 3 Query: 522 MMYQQGCFAGGTVLRLAKDLAENNR 596 MMYQQGCFAGGTVLRLAKDLAENN+ Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAENNK 25
BLAST of FC876310 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.827e-16 Identity = 54/193 (27.98%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 9 KHEPQTYSLRVQLEMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 587 +H+ Q ++V ++ R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2758 QHQKQQQKVQV-IQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 21.1718 bits (43), Expect = 4.827e-16 Identity = 7/14 (50.00%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 602 RVLVVCSEITAVTF 643 R+LVVC+E+ ++ F Sbjct: 2951 RILVVCTEVCSLHF 2964 The following BLAST results are available for this feature:
BLAST of FC876310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876310 ID=FC876310; Name=FC876310; organism=Citrus clementina; type=EST; length=673bpback to top |