FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BURMA (Adenosylhomocysteinase OS=Burkholderia mallei GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.621e-41
Identity = 86/155 (55.48%), Postives = 109/155 (70.32%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDHA AAI      VFA+KGE+L EYW  + +  +W  G   ++I+DDGGDATLL+  G  AE+
Sbjct:    1 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEK 155          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BURM9 (Adenosylhomocysteinase OS=Burkholderia mallei (strain NCTC 10229) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.621e-41
Identity = 86/155 (55.48%), Postives = 109/155 (70.32%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDHA AAI      VFA+KGE+L EYW  + +  +W  G   ++I+DDGGDATLL+  G  AE+
Sbjct:    1 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEK 155          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BURM7 (Adenosylhomocysteinase OS=Burkholderia mallei (strain NCTC 10247) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.621e-41
Identity = 86/155 (55.48%), Postives = 109/155 (70.32%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDHA AAI      VFA+KGE+L EYW  + +  +W  G   ++I+DDGGDATLL+  G  AE+
Sbjct:    1 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEK 155          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.118e-41
Identity = 88/142 (61.97%), Postives = 104/142 (73.24%), Query Frame = 1
Query:  169 KVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG--PDLIVDDGGDATLLIHEGV*AE 588
            KV DLS A +GR EI +AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA  +  VFA+KGE+L+EYW    +  +W   G    ++I+DDGGDATLL+  G  AE
Sbjct:   18 KVADLSLADWGRKEIAIAETEMPGLMALREQYADKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAARNIPVFAYKGESLEEYWDYAHQIFEWASDGSHTANMILDDGGDATLLLILGSKAE 159          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHHB_XENLA (Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy-B PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.118e-41
Identity = 82/135 (60.74%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S A +GR  IE+AE EMPGLM  R  +  S+P KGA+I G LHMT+QTAVLIETLTA+GAEV+W SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ + +  G   ++I+DDGGD T L+H
Sbjct:    7 YKVADISLADWGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQTAVLIETLTAIGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYFKDGKPLNMILDDGGDLTNLVH 141          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.766e-41
Identity = 88/144 (61.11%), Postives = 105/144 (72.92%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEEIL 597
            + +KD+S + FGR EI++AE EMPGLMA R +    +P  GAKI GSLHMTIQTAVLIETL  LGA+V+W SCNIFSTQDHA AAIA    SV+A KGE+L EYW  T   LDWG    P++I+DDGGDAT L+  G  AE+ L
Sbjct:   14 YVIKDISLSDFGRKEIKIAETEMPGLMALRDKHHSDKPLNGAKIAGSLHMTIQTAVLIETLVDLGAQVKWASCNIFSTQDHAAAAIAEQGISVYAKKGESLDEYWQYTHYILDWGT-DSPNMILDDGGDATGLLILGSKAEKDL 156          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHHA_XENLA (Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy-A PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.612e-41
Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S A +GR  IE+AE EMPGLM  R     S+P KGA+I G LHMT+QTAVLIETLTALGAEV+W SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ + +  G   ++I+DDGGD T L+H
Sbjct:    7 YKVADISLADWGRKAIEIAENEMPGLMKMREMHSESKPLKGARIAGCLHMTLQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYFKDGKPLNMILDDGGDLTNLVH 141          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CORDI (Adenosylhomocysteinase OS=Corynebacterium diphtheriae GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.717e-41
Identity = 87/152 (57.24%), Postives = 103/152 (67.76%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            ++ VKDLS A  GR +I LAE EMPGLM  R E+   QP  GA+ITGS+HMT+QTAVLIETL ALGA+VRW SCNIFSTQD A AA+               VFAWKGETL+EYW C +K   WG    P++I+DDGGDAT+ +  G   EE
Sbjct:    5 DYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWG-DELPNMILDDGGDATMAVIRGKQFEE 155          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_FLAJ1 (Adenosylhomocysteinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.161e-41
Identity = 87/135 (64.44%), Postives = 101/135 (74.81%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLI 567
            FKVKD+S AA+GR EIELAE EMPGLMA RAE+   QP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNIFSTQD A AAIA    SV+AWKG   + + WC E+ L +G    P ++I+DDGGD T ++
Sbjct:   11 FKVKDISLAAWGRKEIELAEAEMPGLMALRAEYKDEQPLKGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFSTQDQAAAAIAAAGISVYAWKGLDEESFDWCIEQTLFFGEERKPLNMILDDGGDLTNMV 145          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41
Identity = 83/135 (61.48%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S AA+GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ L +   G  ++I+DDGGD T L+H
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLVH 140          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_BURMA1.621e-4155.48Adenosylhomocysteinase OS=Burkholderia mallei GN=a... [more]
SAHH_BURM91.621e-4155.48Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]
SAHH_BURM71.621e-4155.48Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]
SAHH_NITEU2.118e-4161.97Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHHB_XENLA2.118e-4160.74Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy... [more]
SAHH_PROMP2.766e-4161.11Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHHA_XENLA3.612e-4161.48Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy... [more]
SAHH_CORDI4.717e-4157.24Adenosylhomocysteinase OS=Corynebacterium diphther... [more]
SAHH_FLAJ16.161e-4164.44Adenosylhomocysteinase OS=Flavobacterium johnsonia... [more]
SAHH_PIG8.047e-4161.48Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
back to top