FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41
Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLI 567
            +KVKD+  A +GR EIELAE EMPGLMA R E+G S+P KGA+I G LHMTIQTAVLIETL  LGA V W SCNIFSTQDHA AAIA     V+AWKG T +E+ WC E+ L +G    P ++I+DDGGD T ++
Sbjct:   11 YKVKDIELAEYGRREIELAEAEMPGLMALRKEYGASKPLKGARIAGCLHMTIQTAVLIETLVELGANVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGLTEEEFNWCIEQTLFFGEDRKPLNMILDDGGDLTNMV 145          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41
Identity = 84/135 (62.22%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S AA+GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMHMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAD (Adenosylhomocysteinase OS=Acinetobacter sp. (strain ADP1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.047e-41
Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 1
Query:  148 SASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHE 573
            +AS  ++KV D+S A +GR EI+LAE EMP L+  R  +   +P  GAKI G +HMTIQTAVLIETL  LGAEVRW SCNIFSTQDHA AAIA     VFAWKGET +EY WC E+ ++  G     ++I+DDGGD T L+HE
Sbjct:   12 NASFTDYKVADISLADYGRKEIKLAEAEMPALIGLRKRYAAEKPLAGAKILGCIHMTIQTAVLIETLVELGAEVRWTSCNIFSTQDHAAAAIAASGVPVFAWKGETEEEYNWCLEQQINVNGKPWDANMILDDGGDLTALVHE 154          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.051e-40
Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  AA+GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDHA AAIA+    VFAWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.051e-40
Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  AA+GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDHA AAIA+    VFAWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.373e-40
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   +FKV D+S AA+GR EI +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVMTPAGFTDFKVADISLAAWGRREIIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLIALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTQILHD 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.341e-40
Identity = 87/142 (61.27%), Postives = 103/142 (72.54%), Query Frame = 1
Query:  169 KVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGG--GPDLIVDDGGDATLLIHEGV*AE 588
            +V DLS A +GR EI +AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA+KGE+L+EYW    +  +W   G    ++I+DDGGDATLL+  G  AE
Sbjct:   18 EVADLSLADWGRKEIAIAETEMPGLMALREQYAGKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAARDIPVFAYKGESLKEYWDYAHQIFEWTSDGSHAANMILDDGGDATLLLILGSRAE 159          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 3.058e-40
Identity = 81/135 (60.00%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  AA+GR  +++AE EMPGLM  R ++  S+P KGA+I G LHMT++TAVLIETL ALGAEV+W SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 81/137 (59.12%), Postives = 101/137 (73.72%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIH 570
            ++KVKD+S AA+GR EI++AE EMP LM  R ++   QP  GA+I G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFAWKGET +EY WC ++ +   G     ++++DDGGD T ++H
Sbjct:   12 DYKVKDISLAAWGRKEIDIAEGEMPALMTLREKYRAQQPLAGARILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYVWCIKQTITKDGQPWNANMVLDDGGDLTEILH 148          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDAT 558
            M   ++ +   +++ + +++ A +GR EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LGAEVRW SCNIFSTQDHA AA+A+    +FAWKGET +EYW C    L+   G  P+L++DDGGD T
Sbjct:    1 MENDMETATMTQDYHIANINLADWGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLLLDDGGDLT 144          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_GRAFK8.047e-4162.22Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_BOVIN8.047e-4162.22Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_ACIAD8.047e-4158.74Adenosylhomocysteinase OS=Acinetobacter sp. (strai... [more]
SAHH_RAT1.051e-4061.48Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_MOUSE1.051e-4061.48Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_PSEU51.373e-4058.50Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_NITEC2.341e-4061.27Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_MACFA3.058e-4060.00Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_HAHCH3.994e-4059.12Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH_COXBU3.994e-4054.17Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
back to top