FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDAT 558
            M   ++ +   +++ + +++ A +GR EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LGAEVRW SCNIFSTQDHA AA+A+    +FAWKGET +EYW C    L+   G  P+L++DDGGD T
Sbjct:    1 MENDMETATMTQDYHIANINLADWGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLLLDDGGDLT 144          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDAT 558
            M   ++ +   +++ + +++ A +GR EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LGAEVRW SCNIFSTQDHA AA+A+    +FAWKGET +EYW C    L+   G  P+L++DDGGD T
Sbjct:    1 MENDMETATMTQDYHIANINLADWGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLLLDDGGDLT 144          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDAT 558
            M   ++ +   +++ + +++ A +GR EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LGAEVRW SCNIFSTQDHA AA+A+    +FAWKGET +EYW C    L+   G  P+L++DDGGD T
Sbjct:    1 MENDMETATMTQDYHIANINLADWGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLLLDDGGDLT 144          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40
Identity = 86/147 (58.50%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPADFNDYKVADMSLAAWGRRETFIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCLEQTILKDGAPWDANMILDDGGDLTELLHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40
Identity = 85/142 (59.86%), Postives = 101/142 (71.13%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T++IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTVIIHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.812e-40
Identity = 86/147 (58.50%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    3 AVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEE4 (Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.897e-40
Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   +FKV D+S A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET QEY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVNTPAGFSDFKVADISLADWGRKEVIIAESEMPALMGLRRKYQAEQPLKGAKIIGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEQEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.897e-40
Identity = 85/135 (62.96%), Postives = 99/135 (73.33%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLI 567
            FKVKD+S AA+GR EIELAE EMPGLMA RAE+   QP  GA+I G LHMTIQTAVLIETL ALGAEV W SCNIFSTQD A AAIA     V+AWKG    ++ WC E+ L +G    P ++I+DDGGD T ++
Sbjct:   11 FKVKDISLAAWGRKEIELAEAEMPGLMALRAEYKNEQPLAGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFSTQDQAAAAIAAAGIQVYAWKGLNEPDFDWCIEQTLFFGEDRKPLNMILDDGGDLTNMV 145          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 84/142 (59.15%), Postives = 101/142 (71.13%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A AAIA    +V+AWKGET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIAVYAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D+S A +GR E+ +AE EMP LM  R ++  SQP KGAKI G +HMTIQT VLIETLTALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVLTPAGFTDYKVADISLADWGRKELIIAESEMPALMGLRRKYAASQPLKGAKILGCIHMTIQTGVLIETLTALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGKPWDANMVLDDGGDLTEILHK 149          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_COXBN3.994e-4054.17Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB23.994e-4054.17Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB13.994e-4054.17Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_PSEFS5.216e-4058.50Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSE145.216e-4059.86Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEU26.812e-4058.50Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEE48.897e-4057.82Adenosylhomocysteinase OS=Pseudomonas entomophila ... [more]
SAHH_FLAPJ8.897e-4062.96Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_PSESM1.518e-3959.15Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEMY1.518e-3957.14Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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