FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 80/135 (59.26%), Postives = 100/135 (74.07%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  AA+GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL  LGAEV+W SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPW (Adenosylhomocysteinase OS=Pseudomonas putida (strain W619) GN=ahcY PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.982e-39
Identity = 86/147 (58.50%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   +FKV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A A+IA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPAGFTDFKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPF (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39
Identity = 84/142 (59.15%), Postives = 100/142 (70.42%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A A+IA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    8 ADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39
Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A A+IA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPAGFTDYKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGKPWDANMILDDGGDLTQLLHD 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.381e-39
Identity = 84/136 (61.76%), Postives = 100/136 (73.53%), Query Frame = 1
Query:  190 AAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHEGV*AEEI 594
            A +GR EI++AE EMPGLMA R E+   QP KGA+I G LHMTIQTAVLIETL  LGAE+RW SCNIFSTQDHA AAIA     VFAWKG T QE+ WC E+ +  WG  G  ++I+DDGGD T ++HE   A+E+
Sbjct:   41 AKWGREEIKIAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEGF-NMILDDGGDLTNMMHEPRFAKEM 175          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.767e-39
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D++ AA+GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.767e-39
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D++ AA+GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.767e-39
Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D++ AA+GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD A AAIA     VFAWKGET +EY WC E+  L  G     ++++DDGGD T ++H+
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPG (Adenosylhomocysteinase OS=Pseudomonas putida (strain GB-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.837e-39
Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A A+IA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLTEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PSEP1 (Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.837e-39
Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            ++KV D+S AA+GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD A A+IA     VFAWKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_HUMAN1.518e-3959.26Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]
SAHH_PSEPW1.982e-3958.50Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEPF2.589e-3959.15Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEF52.589e-3957.82Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_BDEBA3.381e-3961.76Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_PSEAE5.767e-3955.78Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB5.767e-3955.78Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA85.767e-3955.78Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEPG9.837e-3960.14Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEP19.837e-3960.14Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
back to top