FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.405e-22
Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV 579
            +K+KDLS A+ G+ +IE AE  MP LM  R  F   +P KG  I+  LH+T +TA L++TL   GA V     N  STQD   AA+  +  SVFAWKGE   EY+   E  +       P++++DDG D    IHE V
Sbjct:    3 YKIKDLSLASEGKKQIEWAERHMPTLMEIRKRFKAEKPLKGINISAVLHVTKETAALVKTLKIGGANVALAGSNPLSTQDDVAAALVEEGISVFAWKGENETEYYSNIESIVKIHE---PNIVMDDGADLHAYIHEKV 137          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METMP (Adenosylhomocysteinase OS=Methanococcus maripaludis GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.864e-21
Identity = 57/133 (42.86%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  172 VKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            VKD+S A  G L++E A+  MP L     EF   +PF+G  I  +LH+  +TA+L ETL   GA++    CN  STQD   AA       V+AW+GET +EY+    K LD      PD+I+DDG D   LIH
Sbjct:    4 VKDMSLAPSGHLKMEWAKRHMPVLCRIAEEFKNDKPFEGLTIGMALHLEAKTAILAETLLEGGAKIVITGCNPLSTQDDVAAACVEKGMEVYAWRGETNEEYYENLNKVLD----SNPDIIIDDGADLIFLIH 132          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METJA (Adenosylhomocysteinase OS=Methanocaldococcus jannaschii GN=ahcY PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.423e-21
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            ++V+D++    G  +I+ A+  MP L   R  F   +PFKG  I  +LH+  +TAVL ETL   GAE+    CN  STQD   AA A+    V+AW+GET++EY+    K LD      PD+++DDG D   L+H
Sbjct:    2 YEVRDINLWKEGERKIQWAKQHMPVLNLIRERFKEEKPFKGITIGMALHLEAKTAVLAETLMEGGAEIAITGCNPLSTQDDVAAACAKKGMHVYAWRGETVEEYYENLNKVLD----HKPDIVIDDGCDLIFLLH 132          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METKA (Adenosylhomocysteinase OS=Methanopyrus kandleri GN=ahcY PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            E+ ++D S A  GR  IE A   MP L A R  F   +P +G  +  +LH+  +TAVL+ETL A GAEV    CN  ST+D   AA+  +   V+AW+GET +EY+   ++ L       PD+IVDDG D    +H
Sbjct:    8 EYAIRDPSLAPKGRDMIEWARDHMPVLGAIRERFEEERPLEGITVGMTLHLEAKTAVLVETLMAGGAEVAITGCNPLSTKDEVAAALVEEGVHVYAWRGETEEEYYQNIDRVL----SHEPDIIVDDGADCIARVH 139          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PYRHO (Adenosylhomocysteinase OS=Pyrococcus horikoshii GN=ahcY PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.250e-21
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  157 GREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 573
            GR++ VKDLS A  G  +I+     MP L   R EF   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD   AA+A+    V+A +GE+ ++Y+    KALD      P++I+DDG D   L+H+
Sbjct:    4 GRDYCVKDLSLADEGWKKIDWVSRFMPVLQHIRREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGESKEQYYEFMHKALDI----RPNIIIDDGADMISLVHK 138          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PYRFU (Adenosylhomocysteinase OS=Pyrococcus furiosus GN=ahcY PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.515e-20
Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  157 GREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 573
            G+++ VKDLS A  G  +I+     MP L   + EF   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD   AA+A+    V+A +GE+ ++Y+    KALD      P++I+DDG D   L+H+
Sbjct:    4 GKDYCVKDLSLAEEGWKKIDWVSRFMPVLQYIKREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGESREQYYEFMHKALDI----RPNIIIDDGADMISLVHK 138          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.995e-20
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            ++ VKD+S A  G  +I+     MP L   R EF   +PFKG +I  +LH+ ++TA L+ TL A GA+V   + N  STQD   AA+A++   V+A +GE+ +EY+    KALD      P++I+DDG D   L+H
Sbjct:    7 DYCVKDISLAPEGMKKIDWVSRFMPVLQHIRREFEEKKPFKGVRIAATLHLEMKTAFLLLTLKAGGAKVSAAASNPLSTQDDVVAALAKEGVKVYAIRGESKEEYYEFMNKALDI----RPNIIIDDGADMVSLVH 138          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KVKD+S A  G  +I   +  MP L   +++F   +PFKG  I   LH+  +T  L  TL A GAEV    CN  STQD A AA A+   +++ W+GET +EY+    + LD      P++++DDG D   L+H
Sbjct:    3 YKVKDISLAPQGEKKIRWVQEHMPVLERIKSDFSEEKPFKGVTIGSCLHLEPKTINLGLTLQAGGAEVAMTGCNPLSTQDDATAAGAKMGLNMYGWRGETNEEYYENIHRVLD----HEPEILIDDGADMIFLVH 133          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAE (Adenosylhomocysteinase OS=Pyrobaculum aerophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.657e-19
Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 573
            E +VKD S A  GR ++  AE+ MP L+  R  F   +P  G  I   LH+T +T VL+ TL A GAEV     N  STQD   AA+A++   V+AW+G + +EY+     A+ +     P + +DDG D T  IH+
Sbjct:    3 ESRVKDSSLADRGREQLYWAELNMPVLLEIRRRFEKEKPLSGHVIAACLHVTKETGVLVRTLAAGGAEVVLIPSNPLSTQDDVAAALAQEGIHVYAWRGMSEREYY----NAIGFALSFNPTITMDDGADLTATIHK 135          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PYRKO (Adenosylhomocysteinase OS=Pyrococcus kodakaraensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.519e-18
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD 552
            +++ VKD+S A  G  +I+     MP L   R +F   +PFKG +I  +LH+ ++TA L+ TL A GAEV   + N  STQD   AA+A+    V+A +GE  ++Y+    KALD      P++I+DDG D
Sbjct:    5 KDYCVKDISLAPSGEKKIDWVSRFMPVLQHIRKDFEERKPFKGVRIAATLHLEMKTAFLLLTLKAAGAEVSAAASNPLSTQDDVVAALAKAGVKVYAIRGEDREQYYEFMHKALD----VKPNIIIDDGAD 131          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_SULSO6.405e-2242.75Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_METMP1.864e-2142.86Adenosylhomocysteinase OS=Methanococcus maripaludi... [more]
SAHH_METJA5.423e-2140.74Adenosylhomocysteinase OS=Methanocaldococcus janna... [more]
SAHH_METKA7.082e-2141.18Adenosylhomocysteinase OS=Methanopyrus kandleri GN... [more]
SAHH_PYRHO9.250e-2141.73Adenosylhomocysteinase OS=Pyrococcus horikoshii GN... [more]
SAHH_PYRFU3.515e-2040.29Adenosylhomocysteinase OS=Pyrococcus furiosus GN=a... [more]
SAHH_PYRAB5.995e-2040.44Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_METTH1.744e-1939.26Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_PYRAE8.657e-1939.42Adenosylhomocysteinase OS=Pyrobaculum aerophilum G... [more]
SAHH_PYRKO2.519e-1839.69Adenosylhomocysteinase OS=Pyrococcus kodakaraensis... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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