FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12
Identity = 57/149 (38.26%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAA-IARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD--ATLL 564
            M  S  KS +     VKDLS A  G+  IE A  EMP L   R  F   +PF G ++    H+T +TA L   L A GA+    + N  STQD   A+ +      VFA KGE    Y      ALD      P++I+DDG D  ATL+
Sbjct:    1 MVSSPIKSEAPVRHDVKDLSLAPLGQQRIEWASREMPVLRQIRDRFEKEKPFAGIRLAACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAASLVVNYGIPVFAQKGEDTATYMRHVNIALD----HRPNIIIDDGCDVVATLV 145          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_ARCFU (Adenosylhomocysteinase OS=Archaeoglobus fulgidus GN=ahcY PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1
Query:  199 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            G  +IE AE  M  L   R +F   +P +G  +  +LH+  +TAVL+ TL   GAEV    CN  STQD    A+     + +A +G  ++EY+      +       PD+++DDG D   L+H
Sbjct:    3 GFRKIEWAERYMKVLGKIREQFRKERPLEGFTVGMALHVEAKTAVLVRTLVDAGAEVAITGCNPMSTQDDVADALRESGIACYAKRGMDVEEYYEALRNVI----RAEPDIVIDDGADLIFLLH 122          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_THEEB1.211e-1238.26Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]
SAHH_ARCFU1.211e-1233.87Adenosylhomocysteinase OS=Archaeoglobus fulgidus G... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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