FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.159e-47
Identity = 93/143 (65.03%), Postives = 110/143 (76.92%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            ++ V D+  A +GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDHA AAIA     VFA+KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G  AE+
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQ 152          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.977e-47
Identity = 92/145 (63.45%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  157 GREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            G +  + D++QAAFGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDHA AAIA  +  VFA KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G  AE+
Sbjct:   14 GVDCVIADINQAAFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.977e-47
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            S +++ V+D+  A FGR EI +AE EMPGLMA R E+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL EYW  T K  +W  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    3 SAQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRREYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFEWHDGGMPNMILDDGGDATMFVHAGLRAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.977e-47
Identity = 94/142 (66.20%), Postives = 110/142 (77.46%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ V D+S AA+GR EIE+AE EMPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G  AE
Sbjct:    5 DYVVADMSLAAWGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQDHAAAAIAETGTPVFAVKGETLEEYWTYTDRIFQWPDGQPSNMILDDGGDATMYILLGARAE 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 93/143 (65.03%), Postives = 110/143 (76.92%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+  A FGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGEAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 93/143 (65.03%), Postives = 110/143 (76.92%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+  A FGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGDAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 93/142 (65.49%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ V D+  A FGR EI +AE EMPGLMACRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     V+A KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    6 DYIVADIGLADFGRKEITIAETEMPGLMACRAEFGETKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVYAIKGESLEDYWIYTDKIFQWADGGFSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.405e-47
Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            + ++F VKDLS A +GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G  AE
Sbjct:    3 ASQDFVVKDLSLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLQALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.753e-47
Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  157 GREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            G +  + D++ AAFGR E+++AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDHA AAIA +   VFA KGETL+EYW  T + L+W  GG P++I+DDGGDAT L+  G  AE+
Sbjct:   14 GTDCVIADINLAAFGRKELDIAETEMPGLMALRAKYGNEKPLKGARIAGSLHMTIQTAVLIETLEELGADVRWASCNIFSTQDHAAAAIAANGTPVFAVKGETLEEYWAYTHRILEWSDGGAPNMILDDGGDATGLVILGTKAEQ 158          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.753e-47
Identity = 92/143 (64.34%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+  A FGR EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQTKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_RALSO1.159e-4765.03Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_SYNPX1.977e-4763.45Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_METNO1.977e-4764.14Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]
SAHH_MESSB1.977e-4766.20Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_RHIEC3.373e-4765.03Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHIE63.373e-4765.03Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_AGRRK3.373e-4765.49Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_OCHA44.405e-4765.52Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_SYNS95.753e-4762.76Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHIL35.753e-4764.34Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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