FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.753e-47
Identity = 93/143 (65.03%), Postives = 108/143 (75.52%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            ++ V D+S AA+GR E+ +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T +  +W  G   ++I+DDGGDATLL+H G  AE+
Sbjct:   11 DYHVADMSLAAWGRRELAIAETEMPGLMAIREEFAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWQYTHRIFEWPEGRHANMILDDGGDATLLLHLGARAEQ 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.514e-47
Identity = 94/143 (65.73%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L +YW  T +  +W  GG  ++I+DDGGDATLL+H G  AE+
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGGDATLLLHLGARAEK 152          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.814e-47
Identity = 92/148 (62.16%), Postives = 113/148 (76.35%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +++    +K+ D+S A +GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKG 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XYLF2 (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M23) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.814e-47
Identity = 92/148 (62.16%), Postives = 113/148 (76.35%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +++    +K+ D+S A +GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKG 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.814e-47
Identity = 92/143 (64.34%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+  A FGR EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.814e-47
Identity = 94/150 (62.67%), Postives = 111/150 (74.00%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEG 576
            +G ++KV DL+ A FGR EI LAE EMPGLMA R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQDHA AA+              SVFAWKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G
Sbjct:   18 NGIDYKVADLTLAEFGRKEIRLAEHEMPGLMALRREYADVQPLKGARISGSLHMTVQTAVLIETLTALGAQVRWASCNIFSTQDHAAAAVVVGPHGTVEEPKGVSVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRG 166          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.282e-46
Identity = 95/155 (61.29%), Postives = 115/155 (74.19%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGV*AEEIL 597
            K+    ++ V DLS AA+GR EI +AE EMPGLMA R EF   QP KGA++TGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDHA AA+A     VFA+KGETL +YW  T +  ++G  G    GP++I+DDGGDATLL+H G  AE+ L
Sbjct:    6 KALHENDYLVADLSLAAWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARVTGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALAVQGTPVFAYKGETLADYWDYTHRIFEFGAAGTDGEGPNMILDDGGDATLLMHLGKRAEKDL 160          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.674e-46
Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +++    +K+ D+S A +GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKG 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.674e-46
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            +++ + D++QA FGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDHA AA+A     VFA KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G  AE+
Sbjct:   15 QDYVIADINQAEFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAMAARDIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.186e-46
Identity = 95/142 (66.90%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ VKD+  A FGR E+++AE EMPGLMACR EFGPSQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T+K   + P G  ++I+DDGGDATL I  G   E
Sbjct:    3 DYIVKDIKLAEFGRKELDIAETEMPGLMACREEFGPSQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAVKGETLEEYWAYTDKIFQF-PEGTCNMILDDGGDATLYILLGARVE 143          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_BORPD5.753e-4765.03Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_AZOSE7.514e-4765.73Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_XYLFT9.814e-4762.16Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_XYLF29.814e-4762.16Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_RHILW9.814e-4764.34Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_NOCFA9.814e-4762.67Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_LEPCP1.282e-4661.29Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_XYLFM1.674e-4662.16Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_SYNPW1.674e-4661.81Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHOCA2.186e-4666.90Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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