FC876325

Overview
NameFC876325
Unique NameFC876325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_RHOPB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodopseudomonas palustris (strain BisB18) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVP 553
            L+LVRHG+S WN KNLFTG  D  LT+KGV EAIEAGK++    +  D+ +TS L RAQ T  L + +  +  +P
Sbjct:    6 LVLVRHGQSEWNLKNLFTGWKDPGLTEKGVAEAIEAGKKLKAQGLVFDVAFTSVLTRAQTTLDLMLNELGQTGLP 80          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_POLSQ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 43/115 (37.39%), Postives = 57/115 (49.57%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN +N FTG  DV LT KG E+A+ AG+  R +    D+ YTS L               RR +  + H +      W            +PVV +W+LNER YG
Sbjct:    4 LVLIRHGESAWNLENRFTGWADVDLTPKGAEQALAAGEHLRKAGYEFDVAYTSVL---------------RRAIRTLWHVQDAMDLMW------------LPVVHSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_METPP (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Methylibium petroleiphilum (strain PM1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 45/115 (39.13%), Postives = 57/115 (49.57%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN +N FTG  DV LT  GV +A +AG+ +  + I  D +YTS L RA  TA                H      RTW            +PV+  W+LNER YG
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKRAIWTA---------------WHCLDGMDRTW------------LPVIKDWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_ARTS2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Arthrobacter sp. (strain FB24) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            LIL+RHG S WN KNLFTG VDV L  +G EEA   G+ +  +N+  D++YTS L RA  TA +A+                +  R W            IPV   W+LNER YG
Sbjct:    5 LILLRHGHSEWNAKNLFTGWVDVDLNDQGREEAARGGELLVENNVLPDVLYTSLLKRAINTANIAL---------------DKADRGW------------IPVKRDWRLNERHYG 92          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA2_NITMU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 44/115 (38.26%), Postives = 58/115 (50.43%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN++N FTG  DV LT KG EEA  +G+  R +    D+ YTS L RA  T  + +                E  + W            IPV ++W+LNER YG
Sbjct:    4 LVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKRAIRTLWIVL---------------DEMDQMW------------IPVESSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: PMG2_YEAST (Phosphoglycerate mutase 2 OS=Saccharomyces cerevisiae GN=GPM2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  320 SNEAALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEA------IEAGKRISNIPVDMI-YTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            SN   L L+RHG+S  N +N+F G +D  LT+KG E+A      IE   + +N+ +  I YTS LIR Q T +  M +  + K  + +  +  + +   +  S+D     IP++  W+LNER YG
Sbjct:    7 SNVMTLFLLRHGQSELNHENIFCGWIDAKLTEKGKEQARHSAELIEQYCKANNLRLPQIGYTSRLIRTQQT-IETMCEEFKLKPQLQVVYDFNKIKLGDEFGSDDKDNMKIPILQTWRLNERHYG 130          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA2_GLOVI (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Gloeobacter violaceus GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPII 559
            A L++VRHG+S+WN +N FTG  DVPLT+KG  EA   G+ I  +P  + +TS L RAQ T  L +    +  VP+I
Sbjct:    2 ALLVMVRHGQSIWNLENRFTGWTDVPLTEKGRAEARACGELIYCVPFAVAFTSKLTRAQDTLRLILEAADQPDVPVI 78          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_THEPX (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Thermoanaerobacter sp. (strain X514) GN=gpmA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 44/115 (38.26%), Postives = 57/115 (49.57%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            ++L+RHGESLWN +N FTG  DV L+ KG+EEA E+GK +       D  +TS L RA  T  + +                E  R W            IPV  +W+LNER YG
Sbjct:    4 VVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVL---------------DELDRMW------------IPVYKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_THEP3 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gpmA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 44/115 (38.26%), Postives = 57/115 (49.57%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            ++L+RHGESLWN +N FTG  DV L+ KG+EEA E+GK +       D  +TS L RA  T  + +                E  R W            IPV  +W+LNER YG
Sbjct:    4 VVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVL---------------DELDRMW------------IPVYKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_RALEH (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=gpmA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 44/115 (38.26%), Postives = 58/115 (50.43%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN +N FTG VDV LT+ G ++A +AGK +  + +  D+ YTS L RA  T               + H + E    W            IPV   W+LNER YG
Sbjct:    4 LVLIRHGESTWNLENRFTGWVDVDLTETGADQARQAGKLLKDAGLGFDVAYTSVLKRAIRT---------------LWHVQDEMDLMW------------IPVRNEWRLNERHYG 91          
The following BLAST results are available for this feature:
BLAST of FC876325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GPMA_RHOPB9.312e-1250.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_POLSQ9.312e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_METPP9.312e-1239.132,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_ARTS29.312e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA2_NITMU9.312e-1238.262,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
PMG2_YEAST1.216e-1135.20Phosphoglycerate mutase 2 OS=Saccharomyces cerevis... [more]
GPMA2_GLOVI1.216e-1146.752,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_THEPX1.588e-1138.262,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_THEP31.588e-1138.262,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RALEH1.588e-1138.262,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC32003D07EF DevOvary1 Citrus clementina cDNA clone C32003D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876325 ID=FC876325; Name=FC876325; organism=Citrus clementina; type=EST; length=677bp
ATGAAAAAGATATTTCTGATGCTCATATGCTGCTTGAGTTAACACTGATT
GAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATCCAAT
CGACTTCTTAACACCTCTGGCACTCACCATGAACTTGGAAATATTAGGGT
GCATTTGATTCCAAAAAGTTTCAAGCTTAATATTGAATTGTCAAGAAACA
GGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCACAGCT
TCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACGACAC
CAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTTCGAC
ATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGTGTTGAT
GTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAGGCTGGAAAGAG
AATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATTCGCG
CGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAAGGTG
CCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTCAGAT
CTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCTTGGC
AATTGAATGAAAGAATGTATGGGGAAT
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