FC876325

Overview
NameFC876325
Unique NameFC876325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11268 contig Ccv1_Contig11268:78..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPI (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP7 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain 70585) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_RHOFD (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN  N FTG  DV LT  G+E+A  AG+  +      D+ YTS L RA  T               + H   E  RTW            +PVV +W+LNER YG
Sbjct:    4 LVLIRHGESTWNLDNRFTGWTDVDLTPLGIEQAKNAGRLLKAEGYEFDVAYTSVLKRATRT---------------LWHVLDEMDRTW------------LPVVNSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_LACLS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN  NLFTG  DV L++ G ++AIEAGK I  + I  D+ YTS L RA  T  LA+                         FS+      +PVV +W+LNER YG
Sbjct:    4 LVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALE------------------------FSDQLW---VPVVKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_LACLM (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN  NLFTG  DV L++ G ++AIEAGK I  + I  D+ YTS L RA  T  LA+                         FS+      +PVV +W+LNER YG
Sbjct:    4 LVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALE------------------------FSDQLW---VPVVKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_DELAS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGK--RISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN +N FTG  DV LT  GVE+A  AG+  +      D+ YTS L RA  T               + H   E  RTW            +PV  +W+LNER YG
Sbjct:    4 LVLIRHGESTWNLENRFTGWTDVDLTATGVEQAKNAGRLLKAEGYDFDLAYTSVLKRATRT---------------LWHTLDEMDRTW------------LPVQHSWRLNERHYG 91          
The following BLAST results are available for this feature:
BLAST of FC876325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GPMA_STRPN2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRPJ2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRPI2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP72.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP42.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP22.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHOFD2.451e-1239.132,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACLS2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_LACLM2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_DELAS2.451e-1239.132,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC32003D07EF DevOvary1 Citrus clementina cDNA clone C32003D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876325 ID=FC876325; Name=FC876325; organism=Citrus clementina; type=EST; length=677bp
ATGAAAAAGATATTTCTGATGCTCATATGCTGCTTGAGTTAACACTGATT
GAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATCCAAT
CGACTTCTTAACACCTCTGGCACTCACCATGAACTTGGAAATATTAGGGT
GCATTTGATTCCAAAAAGTTTCAAGCTTAATATTGAATTGTCAAGAAACA
GGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCACAGCT
TCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACGACAC
CAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTTCGAC
ATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGTGTTGAT
GTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAGGCTGGAAAGAG
AATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATTCGCG
CGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAAGGTG
CCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTCAGAT
CTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCTTGGC
AATTGAATGAAAGAATGTATGGGGAAT
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