FC876325

Overview
NameFC876325
Unique NameFC876325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11268 contig Ccv1_Contig11268:78..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPC (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP8 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M18 GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP6 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M6 GN=gpmA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP3 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M3 GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRP1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pyogenes serotype M1 GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+                           E+  +  +P   +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLTRAIKTTNLAL---------------------------ENAGQLWVPTEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STREM (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 46/115 (40.00%), Postives = 61/115 (53.04%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIAFDLAFTSVLKRAIKTTNLAL-------------EYSDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRE4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus equi subsp. equi (strain 4047) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 46/115 (40.00%), Postives = 61/115 (53.04%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D+ +TS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIAFDLAFTSVLKRAIKTTNLAL-------------EYSDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRAW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptomyces avermitilis GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 45/115 (39.13%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPV--DMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            LIL+RHGES WN KNLFTG VDV L +KG +EA+  G+ + +  +  D+++TS   RA  TA LA+                           E   +  IPV  +W+LNER YG
Sbjct:    8 LILLRHGESEWNAKNLFTGWVDVNLNEKGEKEAVRGGELLKDAGLLPDVVHTSLQKRAIRTAQLAL---------------------------ESADRHWIPVHRSWRLNERHYG 95          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CORJK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Corynebacterium jeikeium (strain K411) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = 2
Query:  308 SKKKSNEAALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVD--MIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            S++ ++   LIL+RHG+S WN  N FTG VDV LT+KG  EA+  G+ I    ++  ++YTS L RA  TA +A+                   R W            IPVV  W+LNER YG
Sbjct:    2 SEQNNSHGNLILLRHGQSEWNASNQFTGWVDVRLTEKGRAEAVRGGEMIKEAGLEPTILYTSLLRRAITTANIAL---------------DAADRHW------------IPVVRDWRLNERHYG 98          
The following BLAST results are available for this feature:
BLAST of FC876325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GPMA_STRPC5.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRPB5.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP85.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP65.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP35.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRP15.459e-1237.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STREM5.459e-1240.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRE45.459e-1240.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRAW5.459e-1239.132,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CORJK5.459e-1237.902,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC32003D07EF DevOvary1 Citrus clementina cDNA clone C32003D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876325 ID=FC876325; Name=FC876325; organism=Citrus clementina; type=EST; length=677bp
ATGAAAAAGATATTTCTGATGCTCATATGCTGCTTGAGTTAACACTGATT
GAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATCCAAT
CGACTTCTTAACACCTCTGGCACTCACCATGAACTTGGAAATATTAGGGT
GCATTTGATTCCAAAAAGTTTCAAGCTTAATATTGAATTGTCAAGAAACA
GGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCACAGCT
TCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACGACAC
CAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTTCGAC
ATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGTGTTGAT
GTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAGGCTGGAAAGAG
AATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATTCGCG
CGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAAGGTG
CCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTCAGAT
CTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCTTGGC
AATTGAATGAAAGAATGTATGGGGAAT
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