FC876338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.356e-44 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 111 PIYRIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 P R +G +A+HPD ++AA++EF + IFVFA +GS ++ KL STP GL++ SLAHA AL VAV+V NISGGHVNPA+TFGA +GG ++L+R++ YW+AQLLG+VVA LLL+ +TGG+ FAL+SGV W+AV+ E MTFGL+Y Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQD-MSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMY 162
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.020e-44 Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 111 PIYRIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 P R +G +A+HPD ++AA++EF + IFVFA +GS ++ K+ ST GL++ +LAHA AL VAV+V NISGGHVNPAVTFGA VGG ++L+R++LYW+AQLLG+V A LLL+ +TGG+ FAL+SGV W+AV+ E VMTFGL+Y Sbjct: 7 PGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMY 161
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.361e-43 Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A G+ G++ ++KA +AEF + ++FVFAG GS +AF +LT+GGA PAGL++ ++AHA ALFV VSV AN SGGH+NPAVTFG VGGHIT+L + YW+AQLLG+ VACLLL+F T G +S G + VVFEIV+TF LVY Sbjct: 3 KLAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.439e-43 Identity = 85/153 (55.56%), Postives = 114/153 (74.51%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A G+ G++ ++KA +AEF + ++FVFAG GS +A+ +LT+GGA PAGL++ ++AHA ALFV VSV ANISGGH+NPAVTFG VGGHIT+L + YW+AQLLG+ VACLLL F T G A+ +G+S VVFE+V+TF LVY Sbjct: 3 KLAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAV-AGISELEGVVFEVVITFALVY 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.269e-42 Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 RIA G+ G++ +LKA +AEF + ++FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT+L YWIAQLLGS VACLLLK+ T GL +++G++ VV EI++TF LVY Sbjct: 3 RIAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.657e-42 Identity = 84/153 (54.90%), Postives = 111/153 (72.55%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +I +G+ G++ +LKA L+EF + ++FVFAG GS +AF+KLT GA PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G +GG+ITL+ YWIAQ LGS+VACLLL F T G +S+G+ + VV EIV+TF LVY Sbjct: 3 KIEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.164e-42 Identity = 84/152 (55.26%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 123 IAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 IA G+ G++ +LKA +AEF + ++FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT+L YWIAQLLGS VACLLLK+ T GL +++G++ + VV EI++TF LVY Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42 Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 3 Query: 132 GTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKL-----TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 G EA+HPD+++A LAEF S +FVFAG+GS +A KL G +TP GL+ +LAHA ALF AVS N+SGGHVNPAVTF A +GG I+++R+I YW+AQL+G+++ACLLL+ +T GL F ++SGVS + ++ EI++TF LVY Sbjct: 12 GRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVY 165
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42 Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A G+ G++ ++KA +AEF + ++FVFAG GS +A+ +LT+GGA PAGL++ ++AHA ALFV VSV ANISGGH+NPAVTFG VGGHIT+L + YWIAQLLG+ +ACLLLKF T G + +G+S VV EIV+TF LVY Sbjct: 3 KLAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGV-AGISELEGVVMEIVITFALVY 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.225e-42 Identity = 82/153 (53.59%), Postives = 112/153 (73.20%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +IA G+ G++ ++KA +AEF + ++FVFAG GS +A++KLT A PAGL++ ++AHAFALFV VS+ AN+SGGH+NPAVT G VGG+IT+L + YWIAQ LGS VACLLLKF T GL +++G+ + VV EI++TF LVY Sbjct: 3 KIAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVY 155 The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bpback to top |