FC876338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.832e-41 Identity = 81/157 (51.59%), Postives = 112/157 (71.34%), Query Frame = 3 Query: 108 MPIYRIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 M R + G EA+HPD+++A+LAEF S IFVFAG+GSG+A K+ A + L++ +LAHAFALF AVS ++SGGHVNPAV+FGA +GG I+++R++ YWIAQLLGS+VA L+L+ T + S F +S GV + + E+VMTFGL+Y Sbjct: 1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMY 157
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 1.832e-41 Identity = 86/153 (56.21%), Postives = 113/153 (73.86%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A G+ ++ +LKA +AEF + ++FVFAG GS +A+S+LT GGA PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVTFG VGGHIT+L ILYW+AQLLG+ VAC LL++ T G + SG+S VV EIV+TF LVY Sbjct: 3 KLAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGV-SGISEIEGVVMEIVITFALVY 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.082e-41 Identity = 83/153 (54.25%), Postives = 110/153 (71.90%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +I IG+ G++ +LKA L+EF + ++FVFAG GS +AF+KLT A PAGL++ ++AHAFALFV VS+ ANISGGH+NPAVT G VGG+IT++ YWIAQ LGS+VACLLL F T G +++G+ + VV EIV+TF LVY Sbjct: 3 KIEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.331e-41 Identity = 82/155 (52.90%), Postives = 111/155 (71.61%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGA--STPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 R +G +A+HPD ++AA++EF + IFVFA +GS ++ K+ + ST GL++ +LAHA L VAV+V N+SGGHVNPAVTFGA VGG ++L+R++LYW AQLLG+V A LLL+ +TGG FAL+SGV +AV+ E VMTFG VY Sbjct: 12 RFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVY 166
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.188e-40 Identity = 81/152 (53.29%), Postives = 109/152 (71.71%), Query Frame = 3 Query: 123 IAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A G+ ++ +L+A LAEF S ++FVFAG GS +A++KLT A GL++ ++ H FALFVAV++GANISGGHVNPAVTFG VGG IT++ + YWIAQLLGS AC LLK+ TGGL ++++G+ S VV EI++TF LVY Sbjct: 4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVY 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.925e-39 Identity = 82/152 (53.95%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 123 IAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 IA G ++ +LKA +AEF S ++FVFAG GS +A++KLT G PAGL++ ++ H F LFVAV++GANISGGHVNPAVTFG +GG IT+L + YWIAQLLG++V +L++F T G+ T L SGV ++ VV EI++TFGLVY Sbjct: 5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGL-SGVGAFEGVVMEIIVTFGLVY 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.833e-34 Identity = 72/153 (47.06%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +I +G EA+ PD +KA + EF + +FVFAG GS MA L +T GL + ++AHAF + V +S G +ISGGH+NPAVT G +GGHI++ R+ LYWI QLL S AC LL + TGG+ T L+SGVS +++EI++TF L++ Sbjct: 3 KIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLV---GNTLVGLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLF 151
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.932e-31 Identity = 76/154 (49.35%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLE-TSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A+G EA+ P L+A +AE +FVF+G GS MA +KL GG T GL + + AHA + V VS G ++SGGH+NPAVT G GGHITL RS LY AQLLGS +ACLLL TGG E A + GV + AV E V+TF L++ Sbjct: 3 KLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKL-GGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLF 155
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.901e-30 Identity = 71/142 (50.00%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 156 PDALKAALAEFFSMIIFVFAGQGSGMAFSKL-TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 P A +AAL+EF + +FVFA +GS K+ D G T GL+ ++AHA AL AV+V N SGGHVNPAVTFG VG I+ R+ LYW AQLLG+V+A LLL+ ++GG+ F L + +A++ E+VMTFGLVY Sbjct: 25 PGATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTG--TLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVY 164
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.530e-30 Identity = 72/154 (46.75%), Postives = 91/154 (59.09%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKF-STGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 + A+G EAS ++A LAE +FVFAG GS MA KL GG T GL + +LAH + V VS G ++SGGH+NPAVT G G ITL RS LY AQLLGS +ACLLL F + AL +GV + V+ E V+TF L++ Sbjct: 3 KFALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLF 156 The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bpback to top |