FC876338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28 Identity = 70/154 (45.45%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 120 RIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++ +G GEAS PD + L E +FVF G G+ M T G ST G L + +L A + V + G +ISGGHVNPAVT VGGH+TL RS LY AQ+L S AC LL++ TGGL T AL+ GV VV E V TF L++ Sbjct: 3 KLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKG--STAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLF 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.569e-27 Identity = 68/156 (43.59%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 108 MPIYRIAIGTPGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLV 575 +P+ ++ +G GEA P L+A E +FVF G S + K GGA A + +A++A A + V + G ++SGGH+NPAVT VGGHITL RS LY AQL GS +ACLLL+ TGG T AL+ GV V E V TF L+ Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLL 158
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 3.355e-27 Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 156 PDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 P AL+A AEFFS +FVF GS ++ LT S + L++ ++A AF LF AV + A++SGGHVNPAVTF +GGHIT+ +I YW +Q+LGS ACL+L + + G ++ ++ + A + E V+TF +VY Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVY 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.709e-26 Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 144 EASHPDA--LKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 EA PD ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S +AC+LL++ +GG+ T AL +G+ +V E+++TF L++ Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLF 163
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.844e-26 Identity = 62/139 (44.60%), Postives = 87/139 (62.59%), Query Frame = 3 Query: 165 LKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S AC+LL+F +GG+ T AL G+S +V E+++TF L++ Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLF 161
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.995e-25 Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 141 GEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 GE ++A LAE +FVF G + MA GA+ P A L ++A A A V V+ G ++SGGH+NPAVT GHIT RS LY AQLL S +AC+LL++ TGG+ T L SG+ +V EI++TF L++ Sbjct: 11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLF 157
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.922e-24 Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 162 ALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +L++ LAEF S +FVF GS ++ LT ++ AG L++ ++A AF LF AV + A++SGGHVNPAVTF +GG I + ++ YW +QLLG+ ACL L + G E ++ ++ + V E V+TF LVY Sbjct: 18 SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVY 157
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.488e-22 Identity = 55/140 (39.29%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 159 DALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +AL+ ++EF S FV A GS M+ KL G S P G++ ++A+A AL +V + N+SGGHVNPAVTF V G I++ ++ YW +Q++ SV+ACL+LK + + ++ ++ + A V E V+ F LVY Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVY 159
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 52/143 (36.36%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAG----LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAF---ALSSGVSSWNAVVFEIVMTFGLV 575 +A +AEF +MI+FVF G+ + F+ + A+ G ++ SLA ++ ++SG H+NPAVT G + I++L++++Y IAQ LG+VVA +L T GLE ++ LS GVS+ + EI++TF LV Sbjct: 12 RAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLV 154
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16 Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A +AEF + ++F++ + + + TD AS P G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY AQ LG++ L+K G A +S+G S+ + EI+ TF LVY Sbjct: 41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVY 187 The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bpback to top |