FC876338

Overview
NameFC876338
Unique NameFC876338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA---LSSGVSSWNAVVFEIVMTFGLV 575
            +A +AEF +  +FVF   GS + F        +     +  SLA   ++        +ISG H+NPAVT G  +   I++ R+++Y IAQ +G++VA  +L   T  L  ++     L+ GV+S   +  EI+ T  LV
Sbjct:   12 RAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLV 150          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK----FSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            +A +AEF + ++F++    + +     T  G     GL+  + A    +FV V   A ISGGH+NPAVTFG F+   ++L R++ Y +AQ LG++    L+K         L   A  ++ G S+  A+  EI+ TF LVY
Sbjct:   36 RAIIAEFIATLLFLYVTVATVIGHKNQT--GPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVY 174          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13
Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKF-----STGGLETSAFALSSGVSSWNAVVFEIVMTFGL 572
            KA  AEF + +IFVF G GS + +        S    ++  S+A   A+         +SGGH+NPA+T    +G  I+LLR++ Y  AQL+G++    +L +     + G L  +  AL++  +   A+V E+++TF L
Sbjct:   12 KAVFAEFLATLIFVFFGLGSALKWP-------SALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVN--ALNNNTTPGKAMVVELILTFQL 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 3
Query:  165 LKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVV-ACLLLKFSTGGL--ETSAFALSSGVSSWNAVVFEIVMTFGL 572
            LKA  AEF + +IFVF G  S + +        S    ++  +LA   A+         +SGGH+NPA+T    VG  I+LLR++ Y +AQL+G++  A +L   + G      +  +L++  +   AVV E+++TF L
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKWP-------SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQL 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.703e-13
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTD---GGASTPA-GLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVSSWNAVVFEIVMTFGLVY 578
            +A +AEF + ++F++    + + +   +D   GG      G++  + A    +F+ V   A ISGGH+NPAVTFG F+   ++L+R++LY +AQ LG++     +K F +   +     A +L+ G ++   +  EI+ TF LVY
Sbjct:   37 RAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVY 181          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13
Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 3
Query:   78 RFSLTKFSIKMPIYRIAIGT----------------PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            R    KFS + PI   A G                 PGE       +A +AEF +  +F++    + M  SK T   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y I Q LG+V    ++K F  G   G    A  ++ G +  + +  EIV TF LVY
Sbjct:    9 RLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVY 193          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13
Identity = 46/140 (32.86%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  165 LKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGL 572
            LKA  AEF + +IFVF G GS + +        S    ++  +LA   A+         +SGGH+NPA+T    VG  I+LLR+  Y  AQL+G++    +L +    L      +  AL++  +   A+V E+++TF L
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKWP-------SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL-YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQL 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGL---ETSAFALSSGVSSWNAVVFEIVMTFGLV 575
            +A LAEF + ++FVF G GS + + +           ++  ++A   A+   V    ++SG H+NPAVT    VG H++ LR++ Y  AQLLG+V    LL   T      + +  AL++  ++  AV  E+ +T  LV
Sbjct:   11 RAVLAEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLV 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGL---ETSAFALSSGVSSWNAVVFEIVMTFGLV 575
            +A LAEF + ++FVF G GS + + +           ++  ++A   A+   V    ++SG H+NPAVT    VG H++ LR++ Y  AQLLG+V    LL   T      + +  AL++  ++  AV  E+ +T  LV
Sbjct:   11 RAVLAEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLV 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.022e-13
Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTD---GGASTPA-GLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-------FSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            +A +AEF + ++F++    + + +   +D   GG      G++  + A    +F+ V   A ISGGH+NPAVTFG F+   ++L+R++LY +AQ LG++     +K        + GG    A  L+ G ++   +  EI+ TF LVY
Sbjct:   37 RAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGG---GANFLADGYNTGTGLAAEIIGTFVLVY 181          
The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
AQP1_HUMAN2.757e-1331.65Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
PIP28_ARATH3.601e-1334.04Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
AQP5_RAT3.601e-1332.14Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_PIG3.601e-1333.09Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
PIP22_ARATH4.703e-1331.72Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP12_MAIZE6.142e-1332.09Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
AQP5_HUMAN6.142e-1332.86Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP2_SHEEP6.142e-1332.37Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_BOVIN6.142e-1332.37Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
PIP23_ARATH8.022e-1331.76Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionC32003E10EF DevOvary1 Citrus clementina cDNA clone C32003E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bp
GACCGCTAGGCAATATACAACGGAGCACAAAACAGAGCCAGCAAGCTTGT
AAGAAGCCTTTTGAGCTAAAACAATATCGTTTTTCTTTGACAAAATTTTC
GATAAAAATGCCAATCTACAGAATTGCCATCGGCACGCCGGGAGAGGCAA
GCCATCCTGATGCGTTAAAGGCGGCTCTAGCTGAGTTTTTCTCGATGATT
ATTTTTGTTTTCGCCGGCCAGGGATCCGGGATGGCCTTTAGCAAGCTAAC
GGATGGCGGGGCGTCCACGCCGGCCGGTCTTATATCTGCATCACTGGCTC
ATGCATTTGCCCTATTTGTAGCTGTTTCAGTTGGTGCAAATATTTCTGGG
GGTCACGTGAACCCAGCTGTGACATTTGGTGCATTTGTTGGAGGCCACAT
TACATTGTTGAGGAGCATCCTGTATTGGATTGCACAGTTGCTAGGATCAG
TTGTTGCTTGCTTGCTGCTCAAGTTTTCCACCGGTGGATTGGAAACATCG
GCATTCGCACTATCATCTGGCGTCTCATCATGGAATGCAGTTGTCTTTGA
GATTGTGATGACCTTTGGCTTGGTCTAC
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