FC876338

Overview
NameFC876338
Unique NameFC876338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.022e-13
Identity = 60/190 (31.58%), Postives = 87/190 (45.79%), Query Frame = 3
Query:   78 RFSLTKFSIKMPIYRIAIGT-------------------PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            R    KFS + PI   A G                    PGE       +A +AEF +  +F++    + M  SK T   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R+I Y I Q LG++    ++K F  G   G    A  ++ G +  + +  EIV TF LVY
Sbjct:    9 RLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVY 196          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12
Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  138 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            PGE       +A +AEF +  +F++    + M  SK +   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R+I Y + Q LG++    ++K F  G   G    A  ++SG +  + +  EIV TF LVY
Sbjct:   45 PGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVY 193          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVSSWNAVVFEIVMTFGLV 575
            +A  AEF + ++FVF G GS + + +      + P+ L    +A AF L +   V A  +ISG H+NPAVT    VG H+++LR+  Y  AQLLG+V    LL   T     G L  +  ALS+  ++  AV  E+ +T  LV
Sbjct:   11 RAVFAEFLATLLFVFFGLGSALNWPQ------ALPSVL---QIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVN--ALSNSTTAGQAVTVELFLTLQLV 142          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 49/151 (32.45%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  138 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLETS---AFALSSGVSSWNAVVFEIVMTFGLVY 578
            PGE       +A +AEF +  +F++    + M   +  +  AS   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y + Q LG++    ++K F  G  +T+   A  ++ G +  + +  EIV TF LVY
Sbjct:   43 PGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVY 191          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  141 GEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETS-----AFALSSGVSSWNAVVFEIVMTFGLVY 578
            GE       +AA+AEF + ++ V     + +   + +  G    AG++  + A    +FV V   A ISGGH+NPAVTF   +   ++L R+ LY +AQ +G+V    L +   GG + +     A  L++G S+   VV E+V TF LVY
Sbjct:   26 GELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGEGG---AGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVY 173          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 3
Query:  138 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVSSWNAVVFEIVMTFGLVY 578
            PGE S     +A +AEF +  +F++    + M   +  +  AS   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y I Q LG++    ++K F     +T    A  ++ G +  + +  EI+ TF LVY
Sbjct:   43 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVY 191          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  138 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            PGE S     +A +AEF +  +F++    + M   K +D   S+  G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y + Q LG++    ++K F  G    L   A  ++ G +  + +  EI+ TF LVY
Sbjct:   43 PGELSSWSFYRAGIAEFMATFLFLYITILTVMGL-KRSDSLCSS-VGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVY 191          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 3
Query:  138 PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVSSWNAVVFEIVMTFGLVY 578
            PGE S     +A +AEF +  +F++    + M   +  +  AS   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y + Q LG++    ++K F     +T    A  ++ G +  + +  EI+ TF LVY
Sbjct:   42 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVY 190          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578
            +A +AEF +  +F++    + M  SK +   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y + Q LG++    ++K F  G   G    A A++ G +  + +  EIV TF LVY
Sbjct:   54 RAGIAEFVATFLFLYISILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVY 192          
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 470
            KA  +EF + ++FVF G GS + + +      + P+GL   ++A   A+   V    +ISG H+NPAVT    VG H++ LR+I Y  AQLLG+V    LL
Sbjct:    6 KAVFSEFLATLLFVFFGLGSALNWPQ------ALPSGL-QIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
PIP13_MAIZE8.022e-1331.58Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_ORYSJ1.368e-1233.77Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQP2_HUMAN1.368e-1237.06Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
PIP15_ARATH1.787e-1232.45Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP28_ORYSJ2.334e-1233.77Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH2.334e-1232.45Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP1_SOLLC3.048e-1233.11Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ARATH3.048e-1231.79Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP15_MAIZE5.200e-1233.33Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
AQP2_ORYAF5.200e-1239.60Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]

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Properties
Property NameValue
Genbank descriptionC32003E10EF DevOvary1 Citrus clementina cDNA clone C32003E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bp
GACCGCTAGGCAATATACAACGGAGCACAAAACAGAGCCAGCAAGCTTGT
AAGAAGCCTTTTGAGCTAAAACAATATCGTTTTTCTTTGACAAAATTTTC
GATAAAAATGCCAATCTACAGAATTGCCATCGGCACGCCGGGAGAGGCAA
GCCATCCTGATGCGTTAAAGGCGGCTCTAGCTGAGTTTTTCTCGATGATT
ATTTTTGTTTTCGCCGGCCAGGGATCCGGGATGGCCTTTAGCAAGCTAAC
GGATGGCGGGGCGTCCACGCCGGCCGGTCTTATATCTGCATCACTGGCTC
ATGCATTTGCCCTATTTGTAGCTGTTTCAGTTGGTGCAAATATTTCTGGG
GGTCACGTGAACCCAGCTGTGACATTTGGTGCATTTGTTGGAGGCCACAT
TACATTGTTGAGGAGCATCCTGTATTGGATTGCACAGTTGCTAGGATCAG
TTGTTGCTTGCTTGCTGCTCAAGTTTTCCACCGGTGGATTGGAAACATCG
GCATTCGCACTATCATCTGGCGTCTCATCATGGAATGCAGTTGTCTTTGA
GATTGTGATGACCTTTGGCTTGGTCTAC
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