FC876339

Overview
NameFC876339
Unique NameFC876339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52
Identity = 106/183 (57.92%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  K+VR     IG+     G DAD C V+ +I++QSPDIA GV        G  +    E IGAGDQG MFG+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY +D
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDD 186          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52
Identity = 102/181 (56.35%), Postives = 132/181 (72.93%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDET E+MPL+ VL+ KL  ++ ++RK+   S+LRPD K +VTVEY
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVEY 183          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52
Identity = 102/181 (56.35%), Postives = 132/181 (72.93%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDET E+MPL+ VL+ KL  ++ ++RK+   S+LRPD K +VTVEY
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVEY 183          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52
Identity = 109/185 (58.92%), Postives = 128/185 (69.19%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNG 638
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITT   VD  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV        G  T +  E IGAGDQG MFG+A +ET E MPL   LA +L  RL EVRK     +LRPDGKTQVT+E Y++NG
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKFGFDADTCAVLTAIDEQSPDIAMGVDQALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPLPISLAHRLSRRLAEVRKTDVLPYLRPDGKTQVTIE-YDENG 190          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52
Identity = 107/183 (58.47%), Postives = 125/183 (68.31%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDAVLDA   QDP ++VACET   T +V+V GEITT   VD  KIVR T R IG+     G D D C VL +I++QSPDIA GV+     +         E IGAGDQG MFG+A DET E MP+   LA KL  RL++VRKN T ++LRPDGK+QVTVEY  D
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIFSQDPMARVACETAVTTGLVLVTGEITTNCYVDIPKIVRSTIREIGYDRAKYGFDCDTCAVLTSIDEQSPDIAMGVNKALEAKTGEMSDEEIEAIGAGDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEYDGD 187          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.089e-51
Identity = 106/176 (60.23%), Postives = 126/176 (71.59%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R+T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P ++GAGDQG MFGYA+DET   MP     A +L  R  +VRKN T  WLRPD K+QVT  Y
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRETIREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPRELGAGDQGIMFGYASDETDVLMPAPVTYAHRLVQRQAKVRKNGTLPWLRPDAKSQVTFAY 173          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.422e-51
Identity = 107/184 (58.15%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDN 635
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K VRDT + IG+     G DA+ C VL +I++QS DIAQGV        G  T+   D IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T ++LRPDGKTQVTVEY + N
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRDTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGTMTEEELDAIGAGDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQN 190          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.857e-51
Identity = 104/178 (58.43%), Postives = 123/178 (69.10%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            LFTSESV EGHPDK+CDQISDA+LDA L+ DP  +VACET   T MVMV GEI+T   VD  K+VR+    IG+     G DA+ C VL +I++QS DIA GV      R       E IGAGDQG MFG+AT+ET E+MPL   +A KL  +L EVRKN T ++LRPDGKTQVTVEY
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILKNDPNGRVACETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEY 181          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.857e-51
Identity = 103/181 (56.91%), Postives = 124/181 (68.51%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP  +VACET   T +V V GEI+T   VD  KIVR T R IG+     G D D C V+ +I++QS DIA GV      +       + +GAGDQG MFGYAT+ET EFMP+   LA +L  RL EVRK+ T  +LRPDGKTQVT+EY +D
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEMDKIDAVGAGDQGMMFGYATNETKEFMPMPIALAHRLSRRLAEVRKDGTLDYLRPDGKTQVTIEYEDD 184          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.425e-51
Identity = 109/185 (58.92%), Postives = 130/185 (70.27%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNG 638
            LFTSESV EGHPDK+CDQISDAVLDA LEQDP S+VACET   T +V+V GEITT   VD +KIVRDT + IG+     G DAD C V+V +++QS DIA GV      +         E IGAGDQG MFGYA++ET E MP    LA KL  +L++VRK+ T S+LRPDGK+QVTVE YN+ G
Sbjct:    6 LFTSESVTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVE-YNEEG 189          
The following BLAST results are available for this feature:
BLAST of FC876339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THEP38.336e-5257.92S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_LACRJ8.336e-5256.35S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD8.336e-5256.35S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_GEOTN8.336e-5258.92S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_CLOTH8.336e-5258.47S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_PHOPR1.089e-5160.23S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_BACP21.422e-5158.15S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_CLONN1.857e-5158.43S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_CLOAB1.857e-5156.91S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_CLOPH2.425e-5158.92S-adenosylmethionine synthetase OS=Clostridium phy... [more]

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Properties
Property NameValue
Genbank descriptionC32003E11EF DevOvary1 Citrus clementina cDNA clone C32003E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876339 ID=FC876339; Name=FC876339; organism=Citrus clementina; type=EST; length=641bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCC
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