FC876339

Overview
NameFC876339
Unique NameFC876339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.425e-51
Identity = 108/183 (59.02%), Postives = 124/183 (67.76%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTK-RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP ++VACE    T +V+V GEITTK  VD  KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T+   E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDD 186          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.168e-51
Identity = 107/180 (59.44%), Postives = 125/180 (69.44%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDN 635
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MVMV GE+TT A VD E++ R+T R IG+   D+G DAD C VL  I +QSPDI QGV      RPED GAGDQG MFGYA+DET   MP     A +L  R  E+RK+    WLRPD K+QVT   Y DN
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQGAGDQGLMFGYASDETDVLMPAPVTYAHRLVKRQAEIRKSGQLDWLRPDAKSQVTF-VYEDN 176          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.168e-51
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+ DQISDAVLDA L QDP+++VACET   T +V+V GEITT   VD  K+VR+T R IG+     G D D C V+ +I++QSPDIA GV+       G  T    E IGAGDQG MFGYAT+ET E MP+   LA +L  RL EVRK+    +LRPDGKTQVTVEY  D
Sbjct:    5 LFTSESVTEGHPDKIADQISDAVLDAILAQDPQARVACETAVTTGLVLVIGEITTSCYVDIPKVVRETIREIGYTRAKYGFDGDTCAVITSIDEQSPDIALGVNRALEAKTGEMTDDEIEAIGAGDQGMMFGYATNETPELMPMPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYDGD 187          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_VIBCM (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 106/172 (61.63%), Postives = 122/172 (70.93%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  WLRPD K+QVT +Y
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTLPWLRPDAKSQVTFQY 174          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_VIBC3 (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 106/172 (61.63%), Postives = 122/172 (70.93%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  WLRPD K+QVT +Y
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTLPWLRPDAKSQVTFQY 174          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_SHEPW (S-adenosylmethionine synthetase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 106/179 (59.22%), Postives = 124/179 (69.27%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GE+TT A VD E+I R T R IG+   D+G DAD C +L  I +QSPDI QGV       P++ GAGDQG MFGYA +ET   MP     + KL  R +EVRK+ T  WLRPD K+QVT  Y ND
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAILNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETDVLMPAPITYSHKLVKRQSEVRKDKTLPWLRPDAKSQVTFAYNND 176          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDAVLDA  E+DP+++VACET   T MVMV GEITT   VD  K+VR+T R IG+     G D D C V+ +I++QS DIA GV        G  + ++ + IGAGDQG MFG+A DET E MP+  +LA KL  +L+EVRKN    +LRPDGK+QVTVEY  D
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGD 187          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 108/183 (59.02%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP ++VACE    T +V+V GEITTK  VD  KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T    E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDD 186          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 104/180 (57.78%), Postives = 124/180 (68.89%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY 623
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT   VD   +VR T + IG+     G DA+ C VL +I++QS DIAQGV      R         E IGAGDQG MFG+AT+ET E MPL   L+ KL  RLTEVRKN T  +LRPDGKTQVT+EY
Sbjct:    9 LFTSESVTEGHPDKICDQISDAILDEILKKDPNARVACETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIEY 188          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 108/185 (58.38%), Postives = 128/185 (69.19%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNG 638
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRKN T S+LRPDGKTQVTVE Y++NG
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENG 190          
The following BLAST results are available for this feature:
BLAST of FC876339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ANATD2.425e-5159.02S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_PSEA63.168e-5159.44S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_CARHZ3.168e-5158.47S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_VIBCM4.137e-5161.63S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_VIBC34.137e-5161.63S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_SHEPW4.137e-5159.22S-adenosylmethionine synthetase OS=Shewanella piez... [more]
METK_CLOCE4.137e-5157.38S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CALS84.137e-5159.02S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BACSK4.137e-5157.78S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_BACHK4.137e-5158.38S-adenosylmethionine synthetase OS=Bacillus thurin... [more]

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Properties
Property NameValue
Genbank descriptionC32003E11EF DevOvary1 Citrus clementina cDNA clone C32003E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876339 ID=FC876339; Name=FC876339; organism=Citrus clementina; type=EST; length=641bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCC
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