FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA2 (Adenosylhomocysteinase OS=Brucella abortus (strain 2308) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA1 (Adenosylhomocysteinase OS=Brucella abortus (strain S19) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.054e-28
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +F VKDLS ADFGR E+++AE EMPGLMA R EFG S+P KG +I GSLHMT+QTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    3 DFIVKDLSLADFGRKELDIAETEMPGLMALREEFGASKPLKGARIAGSLHMTVQTAVLIETLVALGADVRWASCNIFSTQ 82          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.798e-28
Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KG KI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQ
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPA (Adenosylhomocysteinase OS=Rhodopseudomonas palustris GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.798e-28
Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KG KI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQ
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.348e-28
Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KG +I GSLHMTIQTAVLIETLTALGA+VRW SCNI+STQ
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLTALGADVRWVSCNIYSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.348e-28
Identity = 60/80 (75.00%), Postives = 66/80 (82.50%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ V D+  ADFGR EI +AE EMPGLMA R EFG SQP KG +ITGSLHMTIQTAVLIETL ALGAEVRW +CNIFSTQ
Sbjct:   10 DYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRWATCNIFSTQ 89          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.066e-28
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FKV DLS A+FGR E++LAE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 96          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.066e-28
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FKV DLS A+FGR E++LAE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 96          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.066e-28
Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A+ +++ VKD+S A++GR EI +AE EMPGLMA R EFGPSQP KG +I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+STQ
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQ 88          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_BRUA28.069e-2972.29Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_BRUA18.069e-2972.29Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_RHOSH1.054e-2875.00Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]
SAHH_RHOPT1.798e-2871.76Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPA1.798e-2871.76Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPS2.348e-2870.59Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_NOVAD2.348e-2875.00Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_MYCLE3.066e-2872.29Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB3.066e-2872.29Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_HYPNA3.066e-2870.24Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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