FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.066e-28
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KG +I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQ
Sbjct:   15 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQ 93          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.066e-28
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KG +I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQ
Sbjct:   26 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQ 104          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 96          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 99          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 99          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 96          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 99          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 99          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQ 99          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.005e-28
Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ VKD+S ADFGR E+ LAE EMPGLMA R EFGP QP KG +I GSLHMTIQT VLIETL ALGA++RW SCNI+STQ
Sbjct:    9 DYIVKDISLADFGRKELSLAETEMPGLMATREEFGPKQPLKGARIAGSLHMTIQTGVLIETLAALGADIRWVSCNIYSTQ 88          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_BACTN3.066e-2874.68Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_BACFR3.066e-2874.68Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_MYCUA4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCTU4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCMM4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_MYCBT4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO4.005e-2871.08Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_BRAJA4.005e-2872.50Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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