FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_ROSDO (Adenosylhomocysteinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++F VKD++ A+FGR E+++AE EMPGLMA RAE+G S+P  G +I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    3 KDFIVKDIALAEFGRKELDIAETEMPGLMALRAEYGDSKPLAGARIVGSLHMTIQTAVLIETLVALGADVRWASCNIFSTQ 83          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D+S A +GR E+++AE EMPGLMACR EFG  +P KG +ITGSLHMTIQTAVLIETL ALGA++RW SCNIFSTQ
Sbjct:    5 KDYVVADISLAGWGRKELDIAETEMPGLMACREEFGAKKPLKGARITGSLHMTIQTAVLIETLKALGADIRWASCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G ++KV DL+ A+FGR EI LAE EMPGLMA R E+   QP KG +I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQ
Sbjct:   18 NGIDYKVADLTLAEFGRKEIRLAEHEMPGLMALRREYADVQPLKGARISGSLHMTVQTAVLIETLTALGAQVRWASCNIFSTQ 100          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            S +++ V+D+  ADFGR EI +AE EMPGLMA RAE+  SQP KG KI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQ
Sbjct:    3 SNQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRAEYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_STRGG (Adenosylhomocysteinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.596e-27
Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++FKV DLS A FGR EI LAE EMPGLM+ R EF  +QP  G +ITGSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    8 QDFKVADLSLAPFGRKEITLAEHEMPGLMSIRKEFAAAQPLAGARITGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.596e-27
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A+  ++ V+D+  AD+GR EI +AE EMPGLMA RAE+G SQP KG KI GSLHMTIQTAVLIETL  LGA++RW SCNI+STQ
Sbjct:    2 AAANDYIVRDIGLADYGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_STRAW (Adenosylhomocysteinase OS=Streptomyces avermitilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.390e-27
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++FKV DLS A+FGR EI LAE EMPGLM+ R E+  +QP  G ++TGSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    8 QDFKVADLSLAEFGRKEITLAEHEMPGLMSIRKEYAEAQPLAGARVTGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.390e-27
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            SA   +FKV DLS A+FGR EI LAE EMPGLM+ R E+  +QP  G ++TGSLHMT+QTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    2 SADFTDFKVADLSLAEFGRKEITLAEHEMPGLMSIRREYAEAQPLAGARVTGSLHMTVQTAVLIETLVALGAQVRWASCNIFSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_STRCO (Adenosylhomocysteinase OS=Streptomyces coelicolor GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.428e-27
Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++FKV DLS A FGR EI LAE EMPGLMA R E+  +QP  G ++TGSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    8 QDFKVADLSLAAFGRKEITLAEHEMPGLMAIRKEYAEAQPLAGARVTGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.428e-27
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KG +I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQ
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQ 96          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_ROSDO1.522e-2770.37Adenosylhomocysteinase OS=Roseobacter denitrifican... [more]
SAHH_RHILO1.522e-2769.14Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_NOCFA1.522e-2771.08Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_METS41.522e-2769.88Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_STRGG2.596e-2774.07Adenosylhomocysteinase OS=Streptomyces griseus sub... [more]
SAHH_METPB2.596e-2767.86Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_STRAW3.390e-2771.60Adenosylhomocysteinase OS=Streptomyces avermitilis... [more]
SAHH_STRAA3.390e-2769.41Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_STRCO4.428e-2772.84Adenosylhomocysteinase OS=Streptomyces coelicolor ... [more]
SAHH_MYCSS4.428e-2768.60Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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