FC876353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_ECO55 (Diaminopimelate epimerase OS=Escherichia coli (strain 55989 / EAEC) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ + + D+ RIFN+DGSE CGNG RCFARF+ Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV 84
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_ECO45 (Diaminopimelate epimerase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ + + D+ RIFN+DGSE CGNG RCFARF+ Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV 84
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_ECO27 (Diaminopimelate epimerase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ + + D+ RIFN+DGSE CGNG RCFARF+ Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV 84
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_ECO24 (Diaminopimelate epimerase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ + + D+ RIFN+DGSE CGNG RCFARF+ Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV 84
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_DESDA (Diaminopimelate epimerase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITP--EQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 L F K G+GND++ + N + RI E A K+ DR+FGIG+DG++ + D MR+FN+DGSE EMCGN RC +++ Sbjct: 5 LRFTKMQGIGNDYVYI---NGFQERIDSPGELARKISDRHFGIGSDGLVLILPSAT-ADVRMRMFNADGSESEMCGNAVRCVGKYV 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_COXBU (Diaminopimelate epimerase OS=Coxiella burnetii GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDT-DYTMRIFNSDGSEPEMCGNGXRCFARFI 663 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ N++ D+ RIFN+DGSE CGNG RC ARFI Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_COXBR (Diaminopimelate epimerase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDT-DYTMRIFNSDGSEPEMCGNGXRCFARFI 663 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ N++ D+ RIFN+DGSE CGNG RC ARFI Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_COXBN (Diaminopimelate epimerase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDT-DYTMRIFNSDGSEPEMCGNGXRCFARFI 663 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ N++ D+ RIFN+DGSE CGNG RC ARFI Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_COXB2 (Diaminopimelate epimerase OS=Coxiella burnetii (strain CbuG_Q212) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDT-DYTMRIFNSDGSEPEMCGNGXRCFARFI 663 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ N++ D+ RIFN+DGSE CGNG RC ARFI Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_COXB1 (Diaminopimelate epimerase OS=Coxiella burnetii (strain CbuK_Q154) GN=dapF PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDT-DYTMRIFNSDGSEPEMCGNGXRCFARFI 663 ++F K G GNDF+++D T ++T Q +K+ +R FG+G D ++ N++ D+ RIFN+DGSE CGNG RC ARFI Sbjct: 3 VNFTKMQGSGNDFVVID-ATKTPFQLTTSQIQKMANRRFGVGFDQLLVIEPPKNNSVDFHFRIFNADGSEVGQCGNGARCIARFI 86 The following BLAST results are available for this feature:
BLAST of FC876353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 275
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876353 ID=FC876353; Name=FC876353; organism=Citrus clementina; type=EST; length=666bpback to top |