FC876354

Overview
NameFC876354
Unique NameFC876354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.649e-33
Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   22 LSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ L+L+++                   FI +PI ++  K
Sbjct:   84 LTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYVEK 219          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.154e-33
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            D+EK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +LVAD V V SKHN+D Q++WES ++  F++  D     LGRGT I L L++EA                  FINFPIY+W+SK
Sbjct:  139 DREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSSK 285          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.069e-32
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT-SGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK  K L++ D GIGMTK D++KNLGTIA+SGT  F+E++Q+ + D+++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G F I+ D   EPLGRGT+I LH++++                   FI +PI +   K
Sbjct:   72 DKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQFGVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALD-HTEPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFIQYPISLLTIK 214          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.069e-32
Identity = 74/148 (50.00%), Postives = 95/148 (64.19%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGF S +LVAD V V SKHN+D Q++WES ++  F++  D     LGRGT I L L++EA                  FINFPIY+W+SK
Sbjct:  139 DKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFCSAFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSK 285          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32
Identity = 66/112 (58.93%), Postives = 86/112 (76.79%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 339
            +K    L+I D GI MTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL+AD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:   71 NKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADN-SEPLGRGTKIXLYIKED 181          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 5.305e-32
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 339
            DKE K L++ D GIGMTK DL+ NLGTIA+SGT AF+E ++  GD+++IGQFGVGFYS YLVAD V V SK+N D+ YVWES A G F I+  T    + RGT I LHL+++
Sbjct:   68 DKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSACGTFTIT-STPESDMKRGTRITLHLKED 178          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 6.928e-32
Identity = 70/143 (48.95%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL+AD V V SK+NDD+QYVWES   G+F    D   EPL RGT+I L+++++                   FI +PI +   K
Sbjct:   71 NKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESXXXGSFTXKADN-XEPLXRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.491e-31
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 339
            DK  K L++ D GIGMTK +L+ NLGTIA+SGT AF+E ++  GD+++IGQFGVGFYS YLVAD V V+SK+NDD+ Y WES A G F ++  T +  L RGT I LHL+++
Sbjct:   68 DKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVVSKNNDDEAYTWESSAGGTFTVT-PTPDCDLKRGTRIVLHLKED 178          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEP-LGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +KE+K L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS +LVAD V V SK+NDD  Y WES A G+F +    +N+P + RGT+I +H++++                   FI +PI +   K
Sbjct:   71 NKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVR--PFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKLVVEK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEP-LGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +KE+K L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS +LVAD V V SK+NDD  Y WES A G+F +    +N+P L RGT+I ++++++                   FI +PI +   K
Sbjct:   71 NKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVR--PYNDPELTRGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPIKLVVEK 212          
The following BLAST results are available for this feature:
BLAST of FC876354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
HS90B_CHICK1.649e-3350.36Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
ENPL_RAT2.154e-3350.00Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
HSC90_DICDI1.069e-3251.39Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
ENPL_PONAB1.069e-3250.00Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
HSP83_DROPB1.823e-3258.93Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP83_LEIIN5.305e-3258.93Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_DROPE6.928e-3248.95Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP85_TRYCR4.491e-3157.14Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP90_CAEEL1.000e-3047.92Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP90_CAEBR1.000e-3047.92Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]

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Properties
Property NameValue
Genbank descriptionC32003G08EF DevOvary1 Citrus clementina cDNA clone C32003G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876354 ID=FC876354; Name=FC876354; organism=Citrus clementina; type=EST; length=490bp
CTAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTAT
GACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAA
CATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATT
GGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGTTGCTGACTATGT
TGAAGTCATTAGCAAACATAATGATGACAAACAGTATGTATGGGAATCAA
AGGCTGATGGAGCATTTGCAATTTCTGAGGACACATGGAATGAGCCACTA
GGACGAGGAACCGAGATTAAATTGCACCTCAGAGATGAAGCTGGGGAGTA
CTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAATATTCTGAATTTA
TCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGTTGATGTGGATGTT
CCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGAAAG
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