FC876360

Overview
NameFC876360
Unique NameFC876360
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.016e-96
Identity = 153/182 (84.07%), Postives = 168/182 (92.31%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M TV EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH T LKEKF+RMCDKSMIK+RYMYLTE+ILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTV RLAKDLAENNK
Sbjct:    1 MVTVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEDILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVFRLAKDLAENNK 182          

HSP 2 Score: 51.9878 bits (123), Expect = 7.016e-96
Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            + ARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KNARVLVVCSEVTAVTFRGPSDTHLDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.016e-96
Identity = 156/182 (85.71%), Postives = 167/182 (91.76%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M TV E+R AQRA+GPAT+LAIGTATPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIK WGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MVTVGEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 49.2914 bits (116), Expect = 7.016e-96
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARVL+VCSEIT VTFRGP++ HLDS
Sbjct:  182 KGARVLIVCSEITVVTFRGPSEAHLDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 1.194e-95
Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M +V EIR AQRA+GPAT+LAIGTA P++ V Q+ YPD+YF+IT SEH  ELK+KF+RMCDKSMIK RYMYLTEEILKENP++C YMAPSLD RQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPSNRVEQSTYPDFYFKITNSEHKVELKQKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDVRQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 54.299 bits (129), Expect = 1.194e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.032e-95
Identity = 152/180 (84.44%), Postives = 167/180 (92.78%), Query Frame = 1
Query:   61 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 600
            A ++EIR  QRA GPA +LAIGTATP++ V QADYPDYYFRIT SEHM++LK KFKRMC+KSMI+KRYM++TEE LKENPN+CAY APSLDARQD+VVVEVP+LGKEAA KAIKEWG PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN
Sbjct:    6 AEIEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAAAKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 185          

HSP 2 Score: 52.7582 bits (125), Expect = 2.032e-95
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 3
Query:  603 GARVLVVCSEITAVTFRGPADTHLDS 680
            GARVLVVCSEITAVTFRGP+D+HLDS
Sbjct:  187 GARVLVVCSEITAVTFRGPSDSHLDS 212          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 3.458e-95
Identity = 156/180 (86.67%), Postives = 172/180 (95.56%), Query Frame = 1
Query:   64 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            TV+E+R AQRA+GPATVLAIGTATPA+ V QADYPDYYF+ITKS+HM +LKEKFKRMCDKS I+KRYM+LTEEIL++NPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+SKITHL+FCTTSGVDMPGADYQLTK++GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    6 TVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNR 185          

HSP 2 Score: 41.5874 bits (96), Expect = 3.458e-95
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGP 659
            +GARVLVVCSEITAVTFRGP
Sbjct:  185 RGARVLVVCSEITAVTFRGP 204          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 4.512e-95
Identity = 155/182 (85.16%), Postives = 171/182 (93.96%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            MA+++EIR A RADGPAT+LAIGTATP +++ QADYPDYYFR+TKSEHMTELKEKF+RMCDKSMIKKRYMYLTEEILKENPN+C YM  SLD RQD+VV EVP+LGKEAA KAIKEWGQPKSKITH+I CTTSGVDMPGADYQLTKL+GLRPSV+RFM+YQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MASIEEIRQAPRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.5874 bits (96), Expect = 4.512e-95
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 3
Query:  606 ARVLVVCSEITAVTFRGPADTHLDS 680
            ARVLVVCSEITA+ FRGP +  LDS
Sbjct:  184 ARVLVVCSEITAICFRGPTEAALDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 7.679e-95
Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M +V EIRNAQRA+GPAT LAIGTA P + V Q+ YPD+YF+IT SEH TELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C  MAPSLDA QD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MVSVSEIRNAQRAEGPATTLAIGTANPTNCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEIMAPSLDAWQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 54.299 bits (129), Expect = 7.679e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 9.198e-93
Identity = 149/182 (81.87%), Postives = 165/182 (90.66%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M +V EIR AQRA+GPAT++AIGTA PA+ V Q+ YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMYLTEEILK+NP +C YMAPSL ARQD+ VV VP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKDNPRVCEYMAPSLAARQDMAVVVVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 50.0618 bits (118), Expect = 9.198e-93
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARVLVVCSE T VTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEETPVTFRGPSDTHLDS 208          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 2.234e-91
Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 1
Query:   64 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            TV E+R  QRA GPATVLAIGTATPA+ V QADYPDYYFRITKS+H+T+LKEKFKRMCDKSMI+KRYM+LTEE L ENP+MCAYMAPSLDARQD+VV EVPKLGK AA +AIKEWGQPKS+ITHL+FCTTSGVDMPGADYQLTK +GLR  V R MMYQQGCFAGGTVLR+AKD+AENN+
Sbjct:    7 TVDEVRKGQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSDHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLSENPSMCAYMAPSLDARQDVVVTEVPKLGKAAAQEAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLR-VVNRLMMYQQGCFAGGTVLRVAKDVAENNR 185          

HSP 2 Score: 49.6766 bits (117), Expect = 2.234e-91
Identity = 21/27 (77.78%), Postives = 27/27 (100.00%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARV+VVCSEITAVTFRGP+++H+DS
Sbjct:  185 RGARVMVVCSEITAVTFRGPSESHVDS 211          
BLAST of FC876360 vs. ExPASy Swiss-Prot
Match: CHSY_ONOVI (Chalcone synthase OS=Onobrychis viciifolia GN=CHS PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 3.802e-91
Identity = 146/182 (80.22%), Postives = 159/182 (87.36%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 603
            M  V E R  QRA+GP T+ AI TA P + V Q+ YPD+YF+IT SEH  ELKEKF+RM DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+ VVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNK
Sbjct:    1 MVDVAESRRTQRAEGPRTIFAIATANPPNCVEQSTYPDFYFKITNSEHKVELKEKFQRMDDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMFVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 54.299 bits (129), Expect = 3.802e-91
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 3
Query:  600 QGARVLVVCSEITAVTFRGPADTHLDS 680
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208          
The following BLAST results are available for this feature:
BLAST of FC876360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_PEA7.016e-9684.07Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS3_IPOBA7.016e-9685.71Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_CICAR1.194e-9582.97Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHS2_DAUCA2.032e-9584.44Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_SECCE3.458e-9586.67Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSY_DIACA4.512e-9585.16Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHS5_MEDSA7.679e-9583.52Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHS1_MEDSA9.198e-9381.87Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
CHS1_MAIZE2.234e-9182.22Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]
CHSY_ONOVI3.802e-9180.22Chalcone synthase OS=Onobrychis viciifolia GN=CHS ... [more]

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Properties
Property NameValue
Genbank descriptionC32003H03EF DevOvary1 Citrus clementina cDNA clone C32003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876360 ID=FC876360; Name=FC876360; organism=Citrus clementina; type=EST; length=682bp
GAGTGCACACTCACCAAGCACGAGCCACAAACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACG
GCCCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGCGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGT
GGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTGAT
CGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGTGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAAC
AAGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGGTCACTTTC
CGCGGNCCTGCCGATACTCATCTTGATTCTCT
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