FC876370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.781e-62 Identity = 119/210 (56.67%), Postives = 163/210 (77.62%), Query Frame = 2 Query: 59 G*EKMALAFDEFGRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 G + + D+ G PFIL+R QE+K RL G DA K+++ A K VA I+RTSLGP+G+DK+L SPDG++T+TNDGATIL+QM+V++QIAKL+V+LS+SQD EIGDGTTGVVV+AG+LLEQAE L+++GIHPIRIA+GYE A ++AV+HL+ I+ +F + L ++ T+L SK+V++ A IAV AVL+VADL+RK +LIK Sbjct: 3 GLDNAVMVRDDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIK 212
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 211.46 bits (537), Expect = 3.501e-54 Identity = 106/206 (51.46%), Postives = 157/206 (76.21%), Query Frame = 2 Query: 77 LAFDEFGRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 +A DE GRPFI+++ Q K R G +A+K+++ A ++VA I++TSLGP+G+DK+L SPDG++TITNDGATIL QM++DN+IAKL+V+LS+SQD EIGDGTTGVVV+A +LL+QA +L+++GIHPI+IA G++ A+++A+ LE ++L + L++ T+L SK+V++ R AE+AV+AV+ V D +RK DLIK Sbjct: 20 VAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIK 225
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.289e-44 Identity = 97/205 (47.32%), Postives = 143/205 (69.76%), Query Frame = 2 Query: 77 LAFDEFGRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV-DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL-EPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLI 685 L DE G+ F + +++ R++G AN+ +++A L TSLGP GMDK+LQS D D+ +TNDGATIL++M++ +N I++L+V+LS SQD EIGDGTT VVV+A +LL+QA+ LL +G+HPI+I+EG+E+ AVEHL I+++ ++DL E +++ T+L SK+V + R AEI AVL VAD+ERK +LI Sbjct: 4 LLTDELGQAF-QITDEDKGCRIKGQQCILANIGVVRSIATFLSTSLGPTGMDKILQSKDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGFEVGLGHAVEHLSEISEE----ISDLKETMMKAAKTSLGSKIVYKSLERFAEICTDAVLMVADMERKDLDFELI 203
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.354e-42 Identity = 91/177 (51.41%), Postives = 131/177 (74.01%), Query Frame = 2 Query: 122 QEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVAD 652 Q K + + D +++N++A KAV+ +RTSLGP+GMDKM+Q+ +G+VTITNDGATIL+QM+V + AK++VELSR+QD E GDGTT VVV+AG+LL+ EKLL+ GIHP I++ ++ S AV+ L ++ E L D E LV++ T+LNSK+V++ +LA IAV+AVL V + Sbjct: 15 QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEMSTPIE--LTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKVTE 189
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.944e-42 Identity = 93/198 (46.97%), Postives = 131/198 (66.16%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 G P ++L Q + R G DAQ+ N+ AG+ +A +RT+LGPKGMDKML GD+ +TNDG TIL++M V++ AK+++E++++Q+ E+GDGTT VV+AG LL +AE+LL++ IHP I GYEMA AVE L+ IA+ E D E L + MT++ K + + +LAEI V+AV AV D E DLIK Sbjct: 5 GAPIVVLPQNVK--RYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAK--EVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVDEETGKVDKDLIK 198
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39 Identity = 90/186 (48.39%), Postives = 127/186 (68.28%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVAD 652 G+P ++L E R G DAQ+ N+ A + VA +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP I +GY +A+ A E LE IA+ E +D+E L + +T++ K + LAEIAV+AV VA+ Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGIAK--EVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAE 187
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39 Identity = 91/196 (46.43%), Postives = 128/196 (65.31%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDL 682 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA+ + + D E L + MT + K + LAEIAV+AV VA+ H+DL Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDSIAR--DVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQVAEKVGDRYHVDL 197
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.181e-39 Identity = 87/195 (44.62%), Postives = 130/195 (66.67%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLD 679 G+P +L+ E R G DA K N+ A A++ +R+SLGP+GMDKML GD+ ITNDG TIL++MDV++ AK+MVE+S++QD +GDGTT V++AG LL+QA+ L+ + +HP I+EGY MAS A ++ I+ K G ++ L++ T+LNSK + K +LAEI+ +AV +VA+L ++D Sbjct: 4 GQPIFILK--EGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK--IGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVD 194
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.181e-39 Identity = 91/196 (46.43%), Postives = 132/196 (67.35%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDL 682 G P I+L++ ++S G +A +AN+ A +A+A+IL+T+ GPKGMDKML GD+TITN+GATIL++MDV + AK++V++S+ Q+ E GDGT V+ AG LL++AEKLL+ IHP I EGY+ A R A E +E IA+ + +D+E L T+LNSK V + AE+AV+AV VA+ ++DL Sbjct: 13 GIPVIILKEGTQRSY--GREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSY--DDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAERRGDRWYVDL 204
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39 Identity = 85/163 (52.15%), Postives = 119/163 (73.01%), Query Frame = 2 Query: 164 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVAD 652 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ E L+D E L+ + T+LNSK+V++ L+ ++V AV+ V D Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVE--LSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVID 196 The following BLAST results are available for this feature:
BLAST of FC876370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876370 ID=FC876370; Name=FC876370; organism=Citrus clementina; type=EST; length=690bpback to top |