FC876370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36 Identity = 83/185 (44.86%), Postives = 125/185 (67.57%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADL 655 P ++L+ E R +G +AQ+ N+ A KA+A +RT+LGPKGMDKML GD+ I+NDGATIL++MDV++ AK++VE+S++QD +GDGTT VV++G LL+QAE LL++G+HP I+ GY +A A + ++ IA+K D L + +T L+ K LA++ V+AV AVA++ Sbjct: 7 PILVLK--EGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK----STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV 185
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36 Identity = 81/174 (46.55%), Postives = 123/174 (70.69%), Query Frame = 2 Query: 131 KSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVAD 652 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV++ G+LL AEKLL +GIHP IAE ++ A + AVE L ++++ L D LV+ T+L+SK+V++ LA +AV VL++ + Sbjct: 13 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKR--ISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLSLTN 184
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.334e-36 Identity = 79/182 (43.41%), Postives = 123/182 (67.58%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDL 682 R G DA + N+ A +A++ +++T+ GPKGMDKML GDVTITNDGATIL++ ++ + AK++V++++SQD E+GDGT V++AG LL+ AE+LL++ IHP I GY MA A++ L+++A+ + LN+ E L + T+L SK V+ + A+IAV+AV V + ++DL Sbjct: 2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPID--LNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVDL 181
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35 Identity = 90/207 (43.48%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL------EPLVQTCMTTLNSKMVNRCK--RRLAEIAVQAVLAVADLERKGCH---LDLIK 688 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + + DL + L + TTL SK + ++ ++ + A++ VA+ G + LDLIK Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRID--IKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSLDLIK 206
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35 Identity = 90/207 (43.48%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL------EPLVQTCMTTLNSKMVNRCK--RRLAEIAVQAVLAVADLERKGCH---LDLIK 688 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + + DL + L + TTL SK + ++ ++ + A++ VA+ G + LDLIK Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRID--IRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNGGYNVSLDLIK 206
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35 Identity = 82/179 (45.81%), Postives = 122/179 (68.16%), Query Frame = 2 Query: 131 KSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKG 667 K++ + + +K+N+ A +AVA +RTSLGPKGMDKM+Q+ G V I+NDG TIL+ M V + AK++V+LS SQD GDGTT VV++AGSLL A+KLL++GIHP IAE ++ A++ A E + +++ + L+D E L++ T+LNSK+V++ LA + V A L A +G Sbjct: 12 KNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDMSKPID--LSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAALQAAKKTPEG 188
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35 Identity = 81/185 (43.78%), Postives = 120/185 (64.86%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVA 649 G+P I++ ++ R++ DAQ+ N+SA +AVA +R++LGPKGMDKML S GDVT+TNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLER IHP I +GY +A+ A E ++ +A + +D + + T++ K K L+ I AV VA Sbjct: 9 GQPMIIMG--DDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEVDNVA--VDVDPDDKDLIRSVAETSMTGKGAELDKELLSSIIYDAVNQVA 189
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34 Identity = 77/179 (43.02%), Postives = 123/179 (68.72%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 + +K+N+ A +AV+ +RTSLGPKGMDKM+++ +G++ I+NDGATIL+ M V + A+++V++S +QD E GDGTT V ++ GSLL AEKLL +GIHP I+E ++ A+ + E L ++ K L+D E L++ T+L+SK+V++ L+ +AV +VL V + E L+ I+ Sbjct: 24 EVRKSNILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHK--ISLDDKEALIRAASTSLSSKIVSQHSSLLSPLAVNSVLKVMNEEHTNVDLNDIR 200
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34 Identity = 84/203 (41.38%), Postives = 128/203 (63.05%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRR--LAEIAVQAVLAVADLERKGCH---LDLIK 688 G P ++L+ E R G +A +AN+ A + +A +L++SLGP+G+DKML GD+T+TNDGATI+++M++ + AKL+VE++++QD E+GDGTT VVV+AG+LLE+AEKLL+ +HP I EGY A A+ ++ A E + D L + TTL SK V R + + + A+ VA+ G + LD +K Sbjct: 5 GYPVLILK--EGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVE--VEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGGYEVDLDYVK 203
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34 Identity = 85/205 (41.46%), Postives = 135/205 (65.85%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDL---EPLVQTCMTTLNSKMVNRCKR--RLAEIAVQAVLAVADLERKGCH---LDLIK 688 P +LL++ ++S G DA K N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++A+ LL++ IHP I EGY+ A ++E ++++A K + LN L + L + TT++SK + + ++ + + AV VA+ +G + LDLIK Sbjct: 5 PVLLLKEGTQRSS--GRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAEPLPEGGYNVPLDLIK 207 The following BLAST results are available for this feature:
BLAST of FC876370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876370 ID=FC876370; Name=FC876370; organism=Citrus clementina; type=EST; length=690bpback to top |