FC876370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 66/183 (36.07%), Postives = 114/183 (62.30%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAV 646 +P ++L Q ++ G AQ AN+SA KAV+ I+ ++LGP+ M KML P G + +TNDG IL ++DV++ AK M+EL+R QD E+GDGTT V++MAG ++ A+ +ER IHP I Y A +++ +E +A + +N+ + + + + + +K +R + + ++A++AV + Sbjct: 7 QPIMVLNQNTKRES--GKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPID--VNNDDQVNKALSSCIGTKFTSRWGKLITDLALKAVRTI 185
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 71/184 (38.59%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 134 SRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLN-DLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDL 682 +R G AQ +N+ A KAVA ++RT LGP+ M KML P G V +TNDG IL +++V + AK M+EL+R+QD E+GDGTT V+++AG +L A LL+R IHP+ + ++ A A+ ++ I N ++ L++TC+ T K+V R + +A++AV VA +D+ Sbjct: 13 NRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGT---KLVARWSDLMCHLALRAVRTVASTSNGRMEIDI 193
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 71/197 (36.04%), Postives = 111/197 (56.35%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK MVE+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ +ND + ++ +++ +K ++R IA+ AV V E +D+ K Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKK 197
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 71/179 (39.66%), Postives = 111/179 (62.01%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER--IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKG 667 R G + NV+A +A I+++SLGP G+DKML GDVTITNDGATIL+ ++V++ AK++ EL+ QD E+GDGTT VV++A LL+ +++L+++ IHP I GY +A + AV ++ I E G + L+ + T+++SK++ A + V A AV ++KG Sbjct: 14 RSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELG---RDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKG 189
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28 Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER--IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKG 667 R G + NV A ++A I+++SLGP G+DKML GDVTITNDGATIL+ ++V++ AK++ EL+ QD E+GDGTT VV++A LL+ A++L ++ IHP + GY +A + AV ++ I E G + L+ T+++SK++ A + V AVLA+ + +G Sbjct: 11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELG---RDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRG 186
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28 Identity = 69/187 (36.90%), Postives = 119/187 (63.64%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLE-PLVQTC-MTTLNSKMVNRCKRRLAEIAVQAVLAVADL 655 P ILL++ + S+ G +N++A + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA + D + L++ C T L+SK++++ K +++ V AV+ + DL Sbjct: 5 PVILLKEGTDTSQ--GIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVVDAVMMLDDL 189
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28 Identity = 69/197 (35.03%), Postives = 111/197 (56.35%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ ++D + ++ +++ +K ++R IA+ AV V E +D+ K Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKK 197
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28 Identity = 72/184 (39.13%), Postives = 112/184 (60.87%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND-LEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVA 649 P ++L + ++S G AQ N+ A +AVA I+R++LGP+ M KML P G + ITNDG IL ++DV + AK M+ELSR+ D E+GDGTT V+++AG +L AE + IHP I GY A + A+ E A + ++ ++ LVQ+C + +K +R + ++A++AVL V+ Sbjct: 8 PIMVLNSKTQRST--GRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSC---IGAKFSSRWNDIMIDMALKAVLTVS 186
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28 Identity = 69/197 (35.03%), Postives = 110/197 (55.84%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAVADLERKGCHLDLIK 688 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+G GTT V+++AG +L AE LE+ +HP + Y A + L++I+ +ND + ++ +++ +K ++R IA+ AV V E +D+ K Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKTVQFEENGRKEIDIKK 197
BLAST of FC876370 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28 Identity = 77/187 (41.18%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 155 AQKANVSA---GKAVARILRTSLGPKGMDKMLQSPDGDVT-ITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERG-IHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL-EPLVQTCMTTLNSKMVNRCKRRLAEIAVQAVLAV---ADLERKGCHLDLIK 688 A+ A +SA AV +++++LGPKGMDK+LQS + +TNDGATIL+ + +DN AK++V +S+ QD E+GDGTT V V++ LL +AEKL+++ IHP I EGY +AS A++ L + A E L+ TTL+SK++++ K AE+A A+L + +LE H+ +IK Sbjct: 15 AENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLE----HIQIIK 197 The following BLAST results are available for this feature:
BLAST of FC876370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876370 ID=FC876370; Name=FC876370; organism=Citrus clementina; type=EST; length=690bpback to top |