FC876376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13 Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 236 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTLCVVYTV 676 RA +AEFI+ I Y T A G++ IA G +FV V A ISGGH+NPAVTFGL + +++++ V Y +AQ LG+ + L+K Y T GG A + +A G + G+ EII T +VYTV Sbjct: 19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDA----ALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTV 157
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 54/152 (35.53%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 236 RALIAEFIAXXXXXXXXXXXXIGYKSQT-----DPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 +A +AEFI+ I Y T DPA G++ +A G +FV V A ISGGH+NPAVTFGL L +++++ V Y +AQ LGAI G LV+ +G G G+ EII T +VYTV Sbjct: 20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPA---------GLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTV 156
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 54/152 (35.53%), Postives = 70/152 (46.05%), Query Frame = 2 Query: 236 RALIAEFIAXXXXXXXXXXXXIGYKSQT-----DPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 +A +AEFIA I Y T DPA G++ IA A +FV V A ISGGH+NPAVTFGL + ++++ ++Y VAQ LGA V F Y T G S G+ EI+ T +VYTV Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPA---------GLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGA-----SVACFLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTV 156
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 53/159 (33.33%), Postives = 77/159 (48.43%), Query Frame = 2 Query: 212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTLCVVYTV 676 EL+ +A +AEFI+ + + TD G++ + A +FV V A ISGGH+NPAVTFG F+ +SL++A++Y VAQ LG++ L+K GGA A S GVG + E++ T +VYTV Sbjct: 13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGG----AATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIAT--------GGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTV 159
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 E T +A +AEFI+ I Y T+ DG A G++ + A +FV V A ISGGH+NPAV FG F+ ++L+R ++Y++AQ LG+I L+ S +G L++G G L EI+ T +VYTV Sbjct: 13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTV 157
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 53/155 (34.19%), Postives = 73/155 (47.10%), Query Frame = 2 Query: 212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ YMVAQ LGA++G ++ + R N L G S G EI TL V + Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCI 145
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 2 Query: 212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ YM AQ LGA++G ++ + + R N L G S G EI TL V + Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPA-AVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCI 145
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 655 G+G LG+A AFG + + Y GISGGH NPAV+ GL +A ++ + Y VAQ LGAI+ + V A K ++ G G EL+ GYS GL EII T Sbjct: 33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 655 G+G LG+A AFG + + Y GISGGH NPAV+ GL +A ++ + Y VAQ LGAI+ + V A K ++ G G EL+ GYS GL EII T Sbjct: 33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT 655 G+G LG+A AFG + + Y GISGGH NPAV+ GL +A ++ + Y VAQ LGAI+ + V A K ++ G G EL+ GYS GL EII T Sbjct: 33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILT 140 The following BLAST results are available for this feature:
BLAST of FC876376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876376 ID=FC876376; Name=FC876376; organism=Citrus clementina; type=EST; length=692bpback to top |