FC876383

Overview
NameFC876383
Unique NameFC876383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.711e-26
Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +S+  + ET +F+AE+ QLL L+ ++ YSNKEIFLRELISNSSDA  K+R+++L+D +  +   +L I I  DK N T++I D+GIGM++ +++ NLGTIA+SGT+ F E LA
Sbjct:    1 MSLQPQAETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYENDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLA 113          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.711e-26
Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE L D +  +  P L I I  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.711e-26
Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE L D +  +  P L I I  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDAL K+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDAL K+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDAL K+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDAL K+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKNDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 458
            FQ E+NQLL L+I++ YSNKEIFLRELISN+SDAL K+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:    3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.235e-26
Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE L D +  +  P L I I  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA  K+RFE+L +   L+   EL I +  DK  NT+++ D+GIGM++ D+V +LGTIA+SGT +F++ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALANPELLEGGAELKIRVSFDKEANTVTLEDNGIGMSREDVVTHLGTIAKSGTADFLKNLS 113          
The following BLAST results are available for this feature:
BLAST of FC876383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_COXBR1.711e-2651.33Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_BURCH1.711e-2656.60Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA1.711e-2656.60Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_CAMJR2.235e-2660.00Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_CAMJJ2.235e-2660.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJE2.235e-2660.00Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJD2.235e-2660.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ82.235e-2660.00Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_BURCM2.235e-2656.60Chaperone protein htpG OS=Burkholderia ambifaria (... [more]
HTPG_PSEAE3.812e-2651.33Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]

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Properties
Property NameValue
Genbank descriptionC32004B04EF DevOvary1 Citrus clementina cDNA clone C32004B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876383 ID=FC876383; Name=FC876383; organism=Citrus clementina; type=EST; length=467bp
GGAAACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTT
CGCTTCCAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGG
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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