FC876383

Overview
NameFC876383
Unique NameFC876383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 3
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            S+ ET  FQ EI QLL ++IN+ Y+++EIFLRELISN++DA  K+R+  L+ ++  D +  L I I PD+   TL+I D+GIGMTK DL+ N+GTIA SG+K F++ LA   D
Sbjct:    2 SQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGD 114          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_VESOH (Chaperone protein htpG OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 55/105 (52.38%), Postives = 85/105 (80.95%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            +T +FQ E++QLL L+I++ YSNKEIFLRELISN+SDA+ K++F+SL+D + ++ +  L IHI  +K  NT++I D+GIGM++ ++  N+GTIA SGTK+F+++L
Sbjct:    5 QTHSFQTEVSQLLHLMIHSLYSNKEIFLRELISNASDAVDKLKFKSLSDDTLIEGKEALQIHIDVNKDANTITITDNGIGMSEVEVNKNIGTIANSGTKKFLKSL 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURP0 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1106a) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURMS (Chaperone protein htpG OS=Burkholderia mallei (strain SAVP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURMA (Chaperone protein htpG OS=Burkholderia mallei GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURM9 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURM7 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10247) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.501e-26
Identity = 57/106 (53.77%), Postives = 80/106 (75.47%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA  K+RFE+L + +  ++ P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
The following BLAST results are available for this feature:
BLAST of FC876383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_DESHY4.978e-2651.33Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_VESOH6.501e-2652.38Chaperone protein htpG OS=Vesicomyosocius okutanii... [more]
HTPG_BURPS6.501e-2653.77Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP66.501e-2653.77Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP16.501e-2653.77Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP06.501e-2653.77Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURMS6.501e-2653.77Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURMA6.501e-2653.77Chaperone protein htpG OS=Burkholderia mallei GN=h... [more]
HTPG_BURM96.501e-2653.77Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURM76.501e-2653.77Chaperone protein htpG OS=Burkholderia mallei (str... [more]

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Properties
Property NameValue
Genbank descriptionC32004B04EF DevOvary1 Citrus clementina cDNA clone C32004B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876383 ID=FC876383; Name=FC876383; organism=Citrus clementina; type=EST; length=467bp
GGAAACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTT
CGCTTCCAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGG
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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