FC876383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 8.491e-26 Identity = 57/113 (50.44%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449 +S+ ++ ET FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+ K+RFE+L+ L+ EL I + DK T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+ Sbjct: 1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.491e-26 Identity = 57/113 (50.44%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449 +S+ ++ ET FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+ K+RFE+L+ L+ EL I + DK T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+ Sbjct: 1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 56/107 (52.34%), Postives = 81/107 (75.70%), Query Frame = 3 Query: 132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 452 ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA K+RF SL++ + EL + + DK TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L + Sbjct: 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461 S+ ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA K+R+ +LTD + + EL + + DK T++I D+GIGMT+ ++ +LGTIA+SGTKEF L+ A+ Sbjct: 2 SQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEAN 114
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 120 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446 AS ETF+FQ E+ QLL ++ + YSN+EIFLREL+SN+SDA K+R+E+LT+ S E I + DK TLS+ D+GIGM DL++ LGTIARSGT F++AL Sbjct: 4 ASVKETFSFQTEVGQLLDIVAGSLYSNREIFLRELVSNASDACDKLRYEALTNPSLAQNADEFAISLAVDKKAKTLSVSDNGIGMNHGDLLDTLGTIARSGTGAFLDAL 112
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 57/113 (50.44%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449 +S+ ++ ET FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+ K+RFE+L+ L+ EL I + DK T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+ Sbjct: 1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSRPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 57/112 (50.89%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446 +S+ ++ ET FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+ K+RFE+L+ L+ EL I + DK T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L Sbjct: 1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNL 112
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449 ET +FQAE+ QLL L+I++ YSNKEIFLRELISN+SDA K+RFE++ + + + P L I + DK T++I D+GIGM++ + + NLGTIARSGTKEF L+ Sbjct: 4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEAIENSALYENDPNLRIRVSYDKDARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFGKLS 109
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.109e-25 Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 150 AEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446 AE+N+++ LIIN+ Y NKEIFLRELISN+SDAL KIR SLTD+ L EL + I DK N L + D+G+GMT+ +LV NLGTIA+SGT EF+ + Sbjct: 1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 99
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25 Identity = 57/113 (50.44%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449 +S+ ++ ET FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+ K+RFE+L+ L+ EL I + DK T+++ D+GIGM++ D + +LGTIA+SGT +FM+ L+ Sbjct: 3 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDAITHLGTIAKSGTADFMKNLS 115 The following BLAST results are available for this feature:
BLAST of FC876383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876383 ID=FC876383; Name=FC876383; organism=Citrus clementina; type=EST; length=467bpback to top |