FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.583e-51
Identity = 103/181 (56.91%), Postives = 130/181 (71.82%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            +S AQL+  FY+TTCPN ++I+ GV+     +D R  A +IRLHFHDCFVNGCDGSILLD     T  D+       N  A GF++VD +K ALE+ CPG+VSCADILA+ASE  V L+ GPSW V  GR+D  TANRS A+ ++P+PF+TL ++  +FTN G+ D TDLVALSGAHTFGR
Sbjct:   19 ASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPA-----NVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGR 193          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49
Identity = 101/179 (56.42%), Postives = 126/179 (70.39%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            ++  L PDFY ++CP A  I+  V+  AF  + R+ ASL+RLHFHDCFV GCDGS+LLD      SI +EK S  N+ SARGFEVVD +KAALE+ CP  VSCAD L +A+  S  L+GGPSWTVPLGRRD  TA+R+  +++LP P    D +  RF+N GLN  TDLVALSG+HT G
Sbjct:   31 NKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSG---SIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLN-LTDLVALSGSHTIG 205          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.385e-49
Identity = 96/179 (53.63%), Postives = 132/179 (73.74%), Query Frame = 1
Query:  112 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            +AQLT +FY+T+CPN  + +   +++A NS+ R+ AS++RL FHDCFVNGCDGSILLD+ ++ T    E+ +  N NSARGF V+D +K+A+E ACPG+VSCADILAIA+  SV   GGP+W V +GRRD RTA+++ A+ N+P P  +L  L   F+ VGL+   D+VALSGAHT G+
Sbjct:   27 EAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTG---EQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLS-TRDMVALSGAHTIGQ 201          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.326e-47
Identity = 99/177 (55.93%), Postives = 122/177 (68.93%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVSF 663
            FY+ +CP+ SNI+  V+Q A  SD R  A LIRLHFHDCFVNGCDGS+LL++     S    + +   N +  GF +V+ +KAA+E ACPG+VSCADILAIAS  SVNL+GGP W V LGRRD R AN   A   LP+PF+ +  LK +F  V L D+TDLVALSGAHTFG+    F
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVS----ELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQF 173          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.040e-47
Identity = 98/180 (54.44%), Postives = 122/180 (67.78%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S  + L P FY  +CP A  I++ VL+ A   + R+ ASL+RLHFHDCFV GCD SILLD+ A   +I SEK +  N NS RGF+V+D +KA LE ACP  VSCADILA+A+  S  LSGGPSW +PLGRRD RTA+ + A+ N+P P  T+  L   F   GLN+  DLV+LSG HT G
Sbjct:   40 SFYSNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSA---TIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEE-DLVSLSGGHTIG 215          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.597e-47
Identity = 95/181 (52.49%), Postives = 127/181 (70.17%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            +SS A L+P FY  +CPNA  I+   + NA+ +D R+ AS++RLHFHDCFVNGCD S+LLD+     +++SEK S AN +SARGFEV+D +K+ALE+ CP  VSCAD+LA+ +  S+ + GGPSW V LGRRD R A+   + +N+P+P  TL  +   F   GL D TDLVAL G+HT G
Sbjct:   35 TSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSG---TMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIG 211          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.123e-46
Identity = 99/186 (53.23%), Postives = 125/186 (67.20%), Query Frame = 1
Query:   97 DESS---SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            DES+    +  L P FY ++CP A  I+  V+  A   + R+ ASL+RLHFHDCFV GCDGS+LLD      SI +EK S  N+ SARGFEVVD +KAALE+ CP  VSCAD L +A+  S  L+GGPSW VPLGRRD  +A+ S ++ N+P P  T + +  RF N GL D TD+VALSG+HT G
Sbjct:   25 DESNYGGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSG---SIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGL-DLTDVVALSGSHTIG 206          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.915e-46
Identity = 95/178 (53.37%), Postives = 123/178 (69.10%), Query Frame = 1
Query:  115 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            AQL+  FY+ TCPNA N I   ++ A +S+ R+ ASLIRLHFHDCFV GCD SILLD      SI+SEK ++ N  SARGF +++  K  +E  CPG+VSCADIL +A+  +    GGPSWTV LGRRD  TA+++LA+ +LP PF  L+ L   F + GL+   D+VALSGAHT G+
Sbjct:   27 AQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETP---SIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLS-TRDMVALSGAHTIGQ 200          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 92/177 (51.98%), Postives = 129/177 (72.88%), Query Frame = 1
Query:  118 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            QLT +FY+T+CPN  + +   +++A +S  R+ AS++RL FHDCFVNGCDGSILLD+ ++ T    E+ +  N NSARGF V++ +K+A+E ACPG+VSCADILAIA+  SV   GGP+W V +GRRD +TA+++ A+ N+P P  +L  L   F+ VGL+   D+VALSGAHT G+
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTG---EQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLS-TRDMVALSGAHTIGQ 173          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 92/182 (50.55%), Postives = 121/182 (66.48%), Query Frame = 1
Query:  100 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            + S   +L P +Y  +CP  + I+  V+  A   + R+ ASL+RLHFHDCFV GCDGS+LLD+      + +EK S  N+ SARGF+VVD +KA LE  CPG VSCAD+L +A+  S  L+GGPSW VPLGRRD R+A+ S ++ N+P P  T   +  +F   GL D TDLVALSG+HT G
Sbjct:   23 DKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGR---VATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGL-DITDLVALSGSHTIG 200          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERX_TOBAC2.583e-5156.91Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER14_ARATH1.417e-4956.42Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER52_ARATH5.385e-4953.63Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER2_CUCSA1.326e-4755.93Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER9_ARATH5.040e-4754.44Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER36_ARATH8.597e-4752.49Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER15_ARATH1.123e-4653.23Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PERX_NICSY1.915e-4653.37Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PERP7_BRARA9.505e-4651.98Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER49_ARATH9.505e-4650.55Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
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