FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:1..665. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.678e-42
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            S  QAQL+P FY+ +C NA + I   ++ A   + R+ ASLIR+HFHDCFV+GCD SILL+  +   +I+SE+ ++ N  S RGFEV+D  K+ +E  CPGIVSCADI+A+A+  +    GGP W V +GRRD   A ++LA+   LP    TLD L G F+  GLN   DLVALSGAHT G+
Sbjct:   20 SICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTS---TIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLN-TRDLVALSGAHTIGQ 198          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.862e-42
Identity = 93/179 (51.96%), Postives = 117/179 (65.36%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            + AQL+P FY+ +CP A   I   +  A   + R+ ASL+RLHFHDCFV GCDGS+LL++ A  T    E+ +  N  S RGF VVD +KA +E+ CPG+VSCADILA+A+  SV   GGPSW V LGRRD  TA+ +LA+ +LP P   L  L   F    L+  TDLVALSGAHT G
Sbjct:   23 ASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTG---EQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIG 197          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.862e-42
Identity = 86/178 (48.31%), Postives = 118/178 (66.29%), Query Frame = 1
Query:  112 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            QAQL  +FY  +CPNA  I+   + N  ++   + A+LIR+HFHDCFV GCDGS+L+++ + +   D+       N + RGF  +DA+K+ LE+ CPGIVSCADI+A+AS  +V  +GGP+W+VP GRRDGR +N + A  N+P P   +  L+  F N GL D  DLV LSGAHT G
Sbjct:   23 QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATP-----NLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHTIG 194          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.088e-41
Identity = 89/179 (49.72%), Postives = 116/179 (64.80%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S+AQL   FY+ TCP A  I+  V+    N+   + A LIR+HFHDCFV GCDGSIL++  +++  +  EK +  N  + RGF+ +D +K+ALES CPGIVSCADI+ +A+  S+   GGP+W VP GRRDGR +N + A  N+P PF     L   F N GL D  DLV LSGAHT G
Sbjct:   21 SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQV--EKLAPPNL-TVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGL-DVKDLVLLSGAHTIG 195          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.164e-41
Identity = 89/179 (49.72%), Postives = 123/179 (68.72%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S A L   FY+ TCP A +I+  V+  A  SD  + A L+RLHFHDCFV GCDGSIL++N A      SEK +  +    RGFE+V+A+KA LE+ACPG+VSC+DI+A+A+  +++L+ GP++ VP GRRDGR +N SLA +++P    ++++LK +F   GLN   DLV LS AHT G
Sbjct:   22 SLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAI-----SEKNAFGHEG-VRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIG 192          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.133e-41
Identity = 86/180 (47.78%), Postives = 115/180 (63.89%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            SS+AQL  +FY  +CPNA  II   +QN  ++   + A LIR+HFHDCFV GCDGS+L+++ + +   D+       N + RGF  V+ +KA LE  CP  VSCADI+A+ +  +V  +GGPSW+VP GRRDGR +N++ A  N+P P      L+  F N GLN   DLV LSGAHT G
Sbjct:   24 SSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPP-----NLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLN-LKDLVLLSGAHTIG 197          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.397e-41
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVS 660
            FY T+C  A  I+   ++  F  D  +   L+R+HFHDCFV GCDGS+L+D+  ++T+   EK S ANN S RGFEV+D+ KA LE+ C G+VSCADI+A A+  SV ++GG  + VP GRRDGR +  S A  NLP P  T+D L   F+N GL  + ++V LSGAHT GR   S
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTA---EKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHTIGRSHCS 236          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.202e-40
Identity = 83/172 (48.26%), Postives = 107/172 (62.21%), Query Frame = 1
Query:  130 DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            D+Y + CP A  I+ GV     +    + A L+R+HFHDCFV GCDGS+LL +  ND   D+       N + +G+EVVDA K ALE  CP ++SCAD+LA+ +  +V + GGP W VPLGRRDGR +  + A  NLP+PF  +  LK  F N GLN   DLV LSG HT G
Sbjct:   29 DYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDA-----VPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIG 194          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 87/177 (49.15%), Postives = 112/177 (63.28%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVSF 663
            FY+ TCP A +I+   +++  NSD  + A ++R+HFHDCFV GCDGSIL+   A      +EK + AN    RG+E++D  K  LE+ACPG+VSCADILA+A+  SV LSGG SW VP GRRDGR +  S    NLP P  ++D+ K +F   GLN   DLV L G HT G     F
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA------TEKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDV-SNLPAPSDSVDVQKQKFAAKGLN-TQDLVTLVGGHTIGTSECQF 203          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.499e-40
Identity = 83/184 (45.11%), Postives = 115/184 (62.50%), Query Frame = 1
Query:   97 DESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            D       LT D+Y +TCP   ++I   ++     D R  A +IRLHFHDCFV GCDGS+LLD      ++  EK +  N NS +G+++VD +K  +ES CPG+VSCAD+L I +  +  L GGP W VP+GR+D +TA+  LA  NLPTP + L  +  +F + GL+   D+VAL GAHT G+
Sbjct:   22 DTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETE---TLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGK 201          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER5_ARATH1.678e-4250.27Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER70_MAIZE2.862e-4251.96Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER3_ARATH2.862e-4248.31Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH1.088e-4149.72Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER43_ARATH3.164e-4149.72Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER30_ARATH4.133e-4147.78Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER5_VITVI5.397e-4149.43Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1_ARATH1.202e-4048.26Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER2_ARAHY2.679e-4049.15Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER11_ARATH3.499e-4045.11Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
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