FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.268e-39
Identity = 83/172 (48.26%), Postives = 114/172 (66.28%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            +Y+T+CP A +I+   +++ F+SD  I+  L+RLHFHDCFV GCDGS+L+          S + +   N   RG EV+D  KA LE+ CPG+VSCADILA+A+  SV+LS GPSW VP GR+DGR +  + A  NLP+P  ++ + K +F + GL D  DLV L GAHT G+
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKG-------KSAEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEA-SNLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQ 195          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39
Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            ++++AQL   FY+T+CPNA  ++   +  AF  D  I A LIRLHFHDCFV GCDGS+LL    N     +E+ ++ NN S RGF+V+DA K A+E +CP  VSCADI+A A+  S++L+G  S+ VP GRRDGR +N +    +LP P  T   L   F    L+   D+V LSGAHT GR
Sbjct:   29 ATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL--TVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGR 206          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.868e-39
Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVS 660
            S++ AQL+  FY+ +CPNA + I   + +A   + R+ ASL+RLHFHDCFV GCD S+LL    NDTS +  +      N  RGF VV+++KA +ES CPGIVSCADILA+A+   V   GGPSWTV LGRRD  TA+ +    +LP P  +L  L   +    LN  TD+VALSGAHT G+   S
Sbjct:   25 SAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLL----NDTSGEQSQGPNLTLNP-RGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNP-TDMVALSGAHTIGQAQCS 203          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.617e-39
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVS 660
            +++ AQL+P FY+T+CP A   I   +  A  SD R+ ASL+RLHFHDCFV GCD S+LL  +        E+ ++ N  S RGF V+D++K  +E+ C   VSCADIL +A+  SV   GGPSWTVPLGRRD   AN + A+ +LP    +   L+  F   G  +  D+VALSGAHT G+   S
Sbjct:   17 TAASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM--------EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCS 194          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38
Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRGTVS 660
            S++ AQL+  FY+T+CP+A + I   + +A     R+ ASL+RLHFHDCF+ GCD SILL    NDTS +  +      N  R F+VV+++KA +E+ACPG+VSCADILA+A+   V   GGPSWTV LGRRD  T +      +LP P  +L  L   ++   L D TD+VALSGAHT G+   S
Sbjct:   25 STASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILL----NDTSGEQTQPPNLTLNP-RAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCS 203          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.920e-38
Identity = 88/181 (48.62%), Postives = 115/181 (63.54%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            S  AQL+  FY+TTCP A + I   ++++ +S+ R  A +IRL FHDCFV GCD S+LL          SE+ S AN+    G+EV+DA KAA+E  CPG+VSCADILA+A+  +    GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+
Sbjct:   27 SCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG------SERASPANDG-VLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN-TREMVALSGSHTLGQ 199          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.920e-38
Identity = 88/181 (48.62%), Postives = 115/181 (63.54%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGR 648
            S  AQL+  FY+TTCP A + I   ++++ +S+ R  A +IRL FHDCFV GCD S+LL          SE+ S AN+    G+EV+DA KAA+E  CPG+VSCADILA+A+  +    GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+
Sbjct:   27 SCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG------SERASPANDG-VLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN-TREMVALSGSHTLGQ 199          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 84/179 (46.93%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  115 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRG 651
            AQL   FY+ +CP A  I+  +++  F     +TA+L+R+HFHDCFV GCD S+L+D      S +SEK +   N S R F+++D +KA LE+ACP  VSCADI+ +A+  SV L+GGPS+++P GRRDGR +N    D  LP P  ++      FTN G+N   D VAL GAHT G+G
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLID------STNSEK-TAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQG 190          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 82/177 (46.33%), Postives = 113/177 (63.84%), Query Frame = 1
Query:  121 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRG 651
            L P FY+ TCP A +I+   ++ A   + R  AS++R  FHDCFVNGCD S+LLD+  N   +  EK S++N +S R FEVVD +K ALE ACP  VSCADI+ +A+  +V L+GGP W V LGR+D  TA++  +D  +P+P      L   F    L+   D+VALSG+H+ G+G
Sbjct:   23 LRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPN---MLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQG 195          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.275e-38
Identity = 82/175 (46.86%), Postives = 115/175 (65.71%), Query Frame = 1
Query:  121 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            L+P +Y+ TCP A +I+   ++ A ++D  + A+L+R+HFHDCFV GCDGS+LLD+   + +   EK    N  S   F V+D  K ALE  CPGIVSCADIL++A+  +V LSGGP+W VP GR+DGR  ++++  + LP P   +  L+  F   GL+ + DLVALSG HT G
Sbjct:   23 LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKA---EKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLSMH-DLVALSGGHTLG 191          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER25_ARATH2.268e-3948.26Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1_MAIZE2.962e-3947.80Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER66_MAIZE3.868e-3949.46Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER1_HORVU8.617e-3946.24Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER42_MAIZE1.470e-3847.85Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER2_ZINEL1.920e-3848.62Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL1.920e-3848.62Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER57_ARATH2.507e-3846.93Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER17_ARATH2.507e-3846.33Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER64_ARATH3.275e-3846.86Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
back to top