FC876388

Overview
NameFC876388
Unique NameFC876388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.780e-35
Identity = 80/180 (44.44%), Postives = 108/180 (60.00%), Query Frame = 1
Query:  106 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S+ AQL   FY+ +CP A +I+  V+ N F SD  ITA+ +R+ FHDCFV GCD S+L+D      S   EK S   N S RG+E++D  K  LE+ACP  VSCADI+ +A+  SV L+GGP ++VP GRRDG  +N +  D NLP P   +      F   G+N N  +  + G H+ G
Sbjct:   17 SALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPS---EK-STGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVG 190          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 2.869e-34
Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  100 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            E   ++ L  D+Y  +CP A  II   +++ +N    +   +IRL FHDCF+ GCD S+LLD    D +  SEK   + N S +GF+V+DA+K+ LE+ CPG+VSCAD+L +A+ ++V ++GGP + +  GR+D   A R  A+  LP P  TL ++  RF+  G N+  + V+L GAH+ G
Sbjct:   61 EDIDRSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDA---DEAHTSEK-DASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIG 237          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32
Identity = 77/175 (44.00%), Postives = 109/175 (62.29%), Query Frame = 1
Query:  121 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            L+  +Y  +CP A  I+   + NA  +D  + A LIR+ FHDCF+ GCD SILLD+  ++T+   EK S AN  S RG+E++D  K  +E+ CPG+VSCADI+A+A+  +V  +GGP + +P GR DG+  ++    +NLP+PF     L   F   G     D+VALSGAHT G
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTA---EKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLG 194          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32
Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 1
Query:  121 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMAN-NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            L+ +FY   CP   NII   L+  F  DI + A+++R+HFHDCFV GC+ S+LL   A   S   E+ S+ N     + F V++ ++A ++  C  +VSC+DILA+A+  SV LSGGP + VPLGRRD    A++     NLP PF     L   F N  LN  TDLVALSG HT G
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL---AGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIG 216          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.056e-32
Identity = 80/179 (44.69%), Postives = 108/179 (60.34%), Query Frame = 1
Query:  109 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            S+A L   +Y+ +CP A  IIL  ++NA   D ++ A L+R+ FHDCF+ GCD SILLD+  ++    +EK    N  S R F V++  K  LE ACP  VSCAD++AIA+   V LSGGP W+V  GR+DG T +R+   +NLP P   +  L   F   GL+   D+V LSG HT G
Sbjct:   22 SEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSN---QAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIG 194          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 1
Query:  169 ILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  NNNS RGFEV+   K ++  +CP I VSCADILAIA+  S+   GG ++TV LGR D  TAN S A   LP P   L +   +F++       ++VAL+GAHT G
Sbjct:   85 VKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVG 241          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.507e-32
Identity = 81/177 (45.76%), Postives = 113/177 (63.84%), Query Frame = 1
Query:  118 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            QLTP+     C    + +  V+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++ + CP + VSCADILAIA+  SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT G
Sbjct:   75 QLTPE----AC--VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFT-LREMVALAGAHTVG 242          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32
Identity = 82/177 (46.33%), Postives = 111/177 (62.71%), Query Frame = 1
Query:  118 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            QLTP+     C    + + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++   CP I VSCADILAIA+  SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT G
Sbjct:   74 QLTPE----AC--VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFT-LREMVALAGAHTVG 241          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.981e-32
Identity = 79/171 (46.20%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  133 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            FY   C N  +I+  V+Q+   S       ++R+HFHDCFV+GCDGS+LL   A +TS    + +   N S RGFEV++  KA LE ACP  VSCADIL +A+  +V L+GG  W VPLGR DGR +  S  D NLP P  ++   K  F    LN   DLV L G HT G
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTS----ERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIG 201          
BLAST of FC876388 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.064e-31
Identity = 76/181 (41.99%), Postives = 107/181 (59.12%), Query Frame = 1
Query:  103 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFG 645
            SSS A+L+ +FY  +CP A  I+   +++A +SD  +   L+RL FHDCFV GCDGS+L+     + S          N S  GF V++++K  LE  CPG VSCADIL +A+  +V   GGP   +P GRRDGR +  +    N+     T+D +   F++ GL+ + DLV LSGAHT G
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPG-------NASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIG 197          
The following BLAST results are available for this feature:
BLAST of FC876388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER44_ARATH5.780e-3544.44Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER48_ARATH2.869e-3440.66Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH1.205e-3244.00Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER12_ARATH1.574e-3244.63Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER66_ARATH2.056e-3244.69Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER2_SOLLC2.685e-3248.13Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC3.507e-3245.76Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU4.580e-3246.33Suberization-associated anionic peroxidase OS=Sola... [more]
PER69_ARATH5.981e-3246.20Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER18_ARATH5.064e-3141.99Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004B11EF DevOvary1 Citrus clementina cDNA clone C32004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876388 ID=FC876388; Name=FC876388; organism=Citrus clementina; type=EST; length=665bp
GACTCCTTAGACAACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCC
TCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACG
AATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGC
CCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTC
CGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCT
TTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGAT
ACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAG
AGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTC
CTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCC
GTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGA
CGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCAT
TTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAAC
GACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGG
CACAGTGTCATTTTT
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